Ictalurus punctatus (channel catfish): 108270519
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Entry
108270519 CDS
T04658
Symbol
gpc5b
Name
(RefSeq) glypican-5b
KO
K08111
glypican 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ipu00535
]
108270519 (gpc5b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
108270519 (gpc5b)
Proteoglycans [BR:
ipu00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
108270519 (gpc5b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ipu00537
]
Others
108270519 (gpc5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Motif
Other DBs
NCBI-GeneID:
108270519
NCBI-ProteinID:
XP_017332799
Ensembl:
ENSIPUG00000024908
UniProt:
A0A2D0RQM8
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All DBs
Position
10:16318680..16380999
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AA seq
594 aa
AA seq
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MLRETVWRVWICWILMSFGPQWGVQSTGAHSCHEVKTAFHLRQIGPLKWVPETAATDAEL
QICKHQGPTCCTRKMEESYHAAARRGTLQNILSYSLELKYLIIGHAAAVQDTFHSLLSFT
LNHTLSLLDLAYEPIAAESRPLVSTLFSDLALYLRGNDDVSVVRSVRHFFDELFPLVYRH
LVNPGLASSIWSAEGAECLRATRQDLNPFGPHPQALGHGLARVLGVGRSLMQALTVGVDV
LNASESAGMAKDCGKAIVRMQFCSHCKGLTLIRPCQGLCLNVMRGCLAGLSELQGPWSRY
IALLEGTSAALAGGHELELTLLGIRERINDAILSAQLNGPHLSAIVEKVCGPLTESASST
QEGPTHQSPAVLEQSSTVESVSSIPSLSPTVQNNSDDHRDSHVTLRKRSLPLKPSKHDKP
RSLKKISKEFMSHIQRYKSFFSMLPEVLCDSEMVLDEYTCWNGEDVVESYTGSVVGNGLQ
AQKHNPEIKVRGVDPVLTEAKETLERFNQDMWAETGLDDDQHKRLNVDGGSGTETSGECD
DEDGCEGSGEDEDEIGRVIPPFSTPSVQQGSGACSTDSSSLFSLSLFPLLLRLL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgctccgtgagacagtgtggcgagtttggatctgttggatattgatgagttttgggcct
cagtggggagttcagagcacaggtgcacatagctgccacgaggttaaaacagctttccat
ctgcggcagattggccctttaaaatgggtcccagaaacagcggcaacagatgcggagctc
caaatctgcaaacaccagggtccaacctgctgcacacgcaaaatggaggagagctaccat
gctgctgcacgcagaggcacattgcagaacattctctcctacagccttgagctgaagtac
ctcatcattggccatgctgcagccgtccaggacaccttccattccctgctgtctttcaca
ctcaaccacactctctcactcctcgaccttgcctacgaaccaatcgccgctgagtcccgt
cctttagtctccaccctgttctctgacctcgccctctacctgcgtggcaacgatgacgtc
tctgtcgtccggtctgtgcgccacttttttgatgagctattcccactggtctatcgacac
ctggtgaacccagggctggcatcctccatctggtcagcagagggtgcagaatgcctccgt
gccacaaggcaagacctcaacccattcggccctcacccgcaggcactgggacatggtctg
gcacgggtattaggggtcggtcgatcactcatgcaggcgctaacggtgggcgttgatgtc
ctgaacgcctcagaatcagcaggcatggcaaaagattgtggaaaggcaatagtaaggatg
cagttctgctcacattgcaaggggctcacactgatccggccatgccaggggctctgcctg
aatgtgatgaggggttgcctggcaggactgtcagagctgcaagggccatggagccgctac
atagctcttctggagggcacaagtgcagcactggctggagggcatgagctggagctaact
cttctcggtattcgtgagaggatcaacgatgccattctgagtgcccagctgaatggacca
catctcagcgccattgtggaaaaggtgtgtggtcctctcaccgagtctgcctcgtccact
caagaaggtccaacacaccagagtcctgcagtcttagaacagagttcgactgtagagtca
gtctcctccatcccatccttgagccctacagtacagaacaattctgatgatcaccgagac
agccatgttacactgaggaaaagatccttgcctctaaaaccttccaaacatgacaagccc
agaagtctgaagaagatctccaaggagtttatgagtcacattcagaggtacaagtccttc
ttctccatgttgccagaggtgctatgtgacagtgagatggtgctagatgaatacacctgc
tggaacggggaggacgtggtggagagttacacaggctctgtggtggggaatggcctccag
gcccaaaaacacaatcctgagattaaggtcagaggtgtggacccagttttaaccgaggcc
aaagagacactggagagatttaatcaggatatgtgggctgaaacgggactggatgatgat
cagcataaacgcttgaatgtggacggcggcagcggaaccgaaaccagtggcgaatgtgat
gatgaagatgggtgtgaaggttcaggagaggatgaagatgaaataggccgtgtcatcccc
cccttctcaactccctcagtacaacaaggttcaggagcatgcagtacagactcctcctct
ctgttctctctgtctctctttcccctgctgctgcgtctcctgtaa
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