Ictalurus punctatus (channel catfish): 108271990 Help Entry 108271990         CDS       T04658                                  Symbol pbrm1l Name (RefSeq) polybromo 1, like isoform X1   KO K11757   protein polybromo-1 Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:ipu00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     108271990 (pbrm1l)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ipu03021]     108271990 (pbrm1l)    03036 Chromosome and associated proteins [BR:ipu03036]     108271990 (pbrm1l) Transcription machinery [BR:ipu03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      108271990 (pbrm1l) Chromosome and associated proteins [BR:ipu03036]  Eukaryotic type   Chromatin remodeling factors    PBAF complex     108271990 (pbrm1l) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Bromodomain BAH HMG_box HMG_box_2 Motif Other DBs NCBI-GeneID:  108271990 NCBI-ProteinID:  XP_017335518 Ensembl:  ENSIPUG00000023736 UniProt:  W5UJM8 LinkDB All DBs Position 11:8827676..8845448 Genome browser AA seq 1633 aa AA seqDB search MGSKRRRIASPSSSVSGDFDDATSSTPASSWKRRRRTSNATAVDQIAVCNELYNTVRDYK DEQGRQICELFVRVPKRRNQPDYYEVVSQPIDMMKIQQKLRTEDYQDAEQFSEDFKLLIN NAKAYYPADRPEYRAACKLWDLFLVTKNSLLRGGEVEDDEEEEESEDADNPGVSTEEEMS PNYMKGVLEQLLEALVSYTDSSGRLVSELFQKLPSKLQYPDYYAIIKEPIDLRTIAQRIQ MGHYKSISAMSKDIDLLAKNAKAYNEPGSQVYKDANTIKKVFLQRRTELEQAEPTKSSLR IRNRRSAQGDRLPAITVSLQPGSESDEDSILSGSVRYDAGEMESESGHTRLATSDPIFQL YQAVRGGRNTQGQLLAEPFLQLPSRREYPDYYHQIKYPISLQQIREKMRNGEYEGVEQVE SDLNTMFDNARRYNVPNSAIYKRAQKLQQIMQLKMRELRDDEGESLLSTMTPDTGSSKRK SHKKNTKKNRMKALFAAVTEAREAGTGRRLCDLFMVKPSKKDYPDYYQVILEPMDLRTIE SNIRAERYVSEEALMNDMKLMFRNARHYNEEGSQVFNDADILEKIAKEKQKELGPLPGDD DVGSPKLKLRRSGGAASPKKSRSQSSLQQKLSELYEAVRSFTDSRGRRLSTVFLRLPSRS ELPDYYAAIKRPIDMERLRSYMVQGRYQDIDSMAEDFILMFNNACTYNEPESLIYRDALL LHRAFLDTRRNLEKEEEDGEERVGAQVAVAPLVCELIRNLFVSVMGHQDDEGRCYSDSLA EVPAVDPANSEEPPLNLEMIRNNVERGRYRRLDVFQEHFFEVLEKARRLNRTDSEIFEDS VELQQFFVKIRDELCKNGEILLSPALSYTSRHLHVDVEQEKREKLPLEMEEDRLKVEEDK KEEEKTEGGTEGQWSSGLQKTFSQDCSFENSIYSVGDFVYVQPSEANLQPHIVRIEKLWK DEAGEQWLYGCWFYRPGETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCMVIFVKDYFK LQPEGLKPEDVFVCESRYTTRTKAFKKIKMWTIPPSSVKLIPRDVPLPVVRVVSMFVSAA NCDQDKMMADTADDHGSFIEKEREAVPVEVANSEPGCQYYEQLCYNNMWLKVGDCVYIRS HGLIQPRIGRIEKMWEQDGVAFFFGPIFIHPEETEHEPTKMFYQREVFLSNVEETSPMMC IIGKCVVSSFKDFISCRPTEFAEENVHLCESRYIEAEKQMKKFKGLKRFSLSAKVVDDEI YYFRKPLVPSKEPSPLLDKKIEELEAKFADIEDLDEDLDEMEDEDDEAPATPSMPQHQVS LTSDTDLPNIPLQSTPKTMKGLSKKEGAKRKINMSGYILFSSEMRAVIKARHPDFSFGEL SRLVGTEWRNLESTKKSEYEERAAKLVERQERERSLQEQQQQQAAASPRAGMMGNYGPPF MPMQGPPDGMMGMGGTPPHPMGVTALPPQHYFASGMAGYPGMPHPGGMGPGINGIAGSPG PGNPYGLQMGVYGPGQVAPPPYPGQGQLGQNANQPQGAPMFIAPPPRPQRLLHSEAYLKY IEGLSADCPTVSKWDQSLKAGRKDSRLSREQESRLPSHWLKSKGAHTTMVDALWRLRDLM MRDTLSIRQAYNL NT seq 4902 nt NT seq  +upstreamnt  +downstreamnt atgggctccaagagacgacgcatcgcttctccctccagcagtgtgagtggagactttgac gatgccacttcatcaactccagccagtagctggaaaaggaggaggaggacttctaatgcc actgctgttgaccaaattgctgtttgcaatgaattgtacaacactgtcagggactacaaa gatgagcaagggaggcagatctgtgagctgtttgttcgtgttccgaaaagaaggaatcag ccggattactacgaggtggtgagccagcccattgacatgatgaagatccagcagaagctc aggacagaagactaccaagatgcagagcagttctctgaagattttaagctccttataaac aatgccaaagcttactatccggctgatagaccggagtacagggctgcctgtaagttgtgg gatctgtttctagtcacaaagaatagccttcttcggggaggagaggttgaggatgatgag gaagaagaggaaagtgaagatgctgacaacccaggagtctccacagaggaggagatgtca cctaactatatgaagggggtcctagagcagctgttggaggctcttgtgtcttatactgac tcttcagggagattagttagtgaacttttccagaagctgccctctaaactgcaataccca gactactatgccataatcaaagagccaatagatttgcgaaccatagctcagaggatacag atgggacattacaaatccatcagtgccatgtccaaggacattgatcttttggccaaaaat gccaaagcctacaatgaacctggatcacaagtttataaggatgcaaacacaatcaagaag gtatttttgcagaggaggactgaacttgaacaagcagaaccaacaaaatccagcctccgc atcaggaatcggaggtctgctcagggtgatcgtctccctgctattaccgtgtctctgcag cctggctcagagagtgatgaagactccattctctcaggctctgtgcggtatgacgctggg gagatggagtctgaaagtgggcatactcgactagctaccagtgatccgatcttccagttg taccaagctgtcagagggggccgtaacactcagggtcagctcctcgctgagccgttcctc cagctaccttcacgcagagagtaccctgattactaccatcagatcaaataccccatttct ctccagcaaattagagaaaaaatgcggaacggggagtatgaaggagtcgaacaggtggaa tcagaccttaatactatgtttgacaatgctagacgctacaatgtccctaattctgccatt tacaagcgtgctcaaaaattacagcaaataatgcagctaaaaatgagagaacttcgagat gatgagggagaaagtttgctttccaccatgacccctgacacaggaagcagtaagagaaaa agccataagaagaacaccaagaaaaacaggatgaaggcattgtttgcagcagtgacagag gcacgagaggcaggtacaggtcggcgcctctgtgacctcttcatggtgaagccatcaaaa aaggactaccctgattactaccaggttatcttggagcccatggacctgcgcaccattgag agcaatatccgcgctgaacgctatgtcagcgaggaggccctcatgaatgatatgaagctc atgttccgcaacgctcgccactacaacgaggaaggctctcaggttttcaatgatgcagac attctggaaaagattgcaaaggaaaagcagaaggaacttggacctttacctggggatgat gatgttggctcacccaaactcaaactacgaaggagtgggggtgctgcatctcccaagaag tctcgttctcaatcatccctgcagcagaaactgagcgagctctacgaagctgttcgcagt tttacagacagtcgtgggcggcgcctgagcacggtgtttctgcggctgccatcgcgctct gagctgcctgattactacgccgccatcaagcggcctattgacatggagcgtctgcgcagc tacatggtgcagggccgctaccaggacatagattccatggctgaggatttcatccttatg ttcaacaatgcctgtacatacaacgagcctgagtcgctcatctaccgcgatgcactgctg ctccacagggccttccttgacacacgccgcaacttggagaaggaggaagaggatggagag gaaagagtgggagctcaggtggctgtagcgccgctggtttgtgagcttattcggaatcta tttgtgtcggtgatgggccatcaagacgacgagggccgctgctacagtgactcgctcgca gaggtgcctgctgtggatcctgccaactcggaggaaccacctcttaacttggagatgatc cgcaacaacgtagagcgtggacgctatcggaggctggatgtgtttcaggagcatttcttt gaggtgctggagaaagccagacgcctcaacagaacagattctgagatatttgaggactcg gttgagctacagcagttctttgtgaagatccgagatgagctatgcaagaatggcgagatc ctactctccccagcactgagctatacatccagacatctgcatgtagatgtggagcaggag aagagagaaaaactgcctctggaaatggaggaagatcgactcaaagttgaggaagacaag aaagaggaggaaaagacagagggtggtacagagggacagtggtcttcaggtcttcagaaa acctttagtcaagactgcagctttgagaacagcatctacagtgtaggagattttgtgtat gtgcaaccatctgaagccaacctgcagccccacattgtaagaattgagaaactgtggaag gatgaggctggtgagcagtggctgtacggctgttggttttaccgaccaggtgaaaccttc cacctagctacacgcaagttcctggaaaaggaagtgttcaagagtgactactacaacaaa gttccagtcagtaagatactggggaaatgcatggtcatatttgtaaaggattacttcaaa cttcagcccgagggcctcaagcccgaggatgtctttgtttgcgagtctcgttacacgacc cggaccaaggccttcaagaagatcaaaatgtggaccatcccaccaagctctgtgaaatta atccctcgtgatgtgccattacctgtcgtcagagttgtgtccatgttcgtcagtgctgca aattgtgaccaggataagatgatggcagacactgctgatgatcatggtagctttattgag aaagagagagaggctgttcctgtagaggtggccaatagtgaacctggatgtcagtactac gaacagctatgctacaataacatgtggctgaaagtgggtgattgtgtctacattcgatct catggattgatacagccacgaattggcaggattgagaagatgtgggagcaggatggagtt gctttcttctttgggccgatattcatccaccctgaggagacagaacatgagcccaccaag atgttctaccagcgtgaagtgttcctgagcaacgtggaggagacctcccccatgatgtgc attataggaaagtgtgttgtctcctcctttaaggactttatttcctgtaggcccactgag tttgcagaggagaacgtacacctgtgtgagagccgctacattgaggcagagaagcagatg aaaaaatttaagggccttaaacgattttccctttcagcgaaagtggtggacgatgagatc tactacttcagaaagccgcttgtgccttccaaggaaccatctcccctgctggataaaaag attgaagagctagaggccaaatttgcagatattgaggacctggatgaagatctagatgag atggaggatgaggatgacgaagcaccagcaacaccctccatgccccagcatcaggtttca ctgactagtgatacggaccttcctaacataccactacagtctacaccaaagacgatgaaa ggtctatccaagaaagaaggagccaagcgcaagatcaacatgagtggctacattctgttt agcagcgagatgcgcgctgtcatcaaggctcgacacccagatttctcctttggagagcta agtcgtcttgtgggtacggagtggaggaacctggaatctactaagaaatcagagtatgaa gagcgggcagctaaactggtagaacggcaggaacgagagaggtccctccaggaacagcag cagcagcaggcagcagcttctccgagagcaggcatgatgggaaattatggcccacccttc atgcctatgcagggtcctcctgatggcatgatgggtatgggtggcacaccccctcacccc atgggggtgaccgcgttgccacctcagcactactttgcatcaggcatggctgggtaccct ggtatgccccatcctggtggaatgggacctggtattaatggtatagctggaagtcctggt ccaggaaacccttatgggcttcagatgggtgtatatggacccgggcaggtggctccacct ccatacccaggccagggtcagctgggtcagaatgccaaccaaccacaaggcgcacccatg ttcatagcgcctcctcccaggccgcagcgcctcttgcattcagaagcctatctgaaatac atagaaggactcagtgcagattgccccactgtcagcaaatgggaccagagccttaaggct ggaaggaaagactctcgcctgagtagagagcaggagagtcgtcttccttctcattggctg aagagcaaaggggctcacaccacaatggttgatgcattgtggcgacttagagacttaatg atgagagacacactcagcatccgacaagcttacaacctttaa

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