Ictalurus punctatus (channel catfish): 108272271
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Entry
108272271 CDS
T04658
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108272271
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108272271
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108272271
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108272271
Peptidases and inhibitors [BR:
ipu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108272271
Ubiquitin system [BR:
ipu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108272271
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108272271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
108272271
NCBI-ProteinID:
XP_017336073
Ensembl:
ENSIPUG00000008925
UniProt:
A0A2D0RZZ3
LinkDB
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Position
11:17943374..17971932
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AA seq
859 aa
AA seq
DB search
MATDLGELLVPYMPTIRVPRSGDRVYKSECAFSYDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAVPRRRNGKVFLDLELNRDFNGDDFEYEDEAKL
VIFPDHYEIPLPNIEELPALVTIACDAILNAASAYKKQEQDSWEEELQVSKHARSLRQQE
NGVRIPPSGWKCAKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYKETKFPLAVK
LDTITPDGADVYSFDEEEAVLDPHIAEHLTHFGIDMLKMQRTENGHHTDNHVQPRATEWE
VIQESGLKLKAVYGSGYTGLRNLGNSCYLSTTMQVLFSIPEFQRAYVGNLQRIFDYSPLD
PTQDFSTQMAKLGHGLLSGQYSKPPIKSELIEQVMKEEYKQQHRGISPRMFKALVSKGHP
EFSSNRQQDAQEFFLHFINLVERNSSGSENPSDVFRFIVEERVQCCQSQKVRYTQRVDYL
MQLPVPIEAATNREELIAYETKRKDAEKNLRAPPDPVRARIPFTACLQAFNEPENVLDFW
SSALQAKSAGVKTSRFTTFPEYMVVQLKKFTFGVDWVPKKLDVSVDMPDFMDLNRFRATG
LQAGEEELPDLTPPIVIPEDIRDSSVNNSLESPEIDEASVMQLAEMGFPLEACRKAVYYT
GNMGAEMAFNWIIAHMEEPDFAEPLAIPSYMEADLPSASFPTVSPLDNQPPEESISILTS
MGFPRHHTIRALKATNNNLERALDWIFTHPESEEESEAMSDMVDTEPNDTSFSNANTHSD
STLSPEQEMSSPRVRDGPGRYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDHRVCLS
ESPPKDLGYIYFYRRLPSC
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggccacggatctgggcgagctgctggtgccgtacatgcccaccatacgggtgccgaga
tcaggagacagagtgtacaagagcgagtgcgccttttcctatgactctccggaatcagaa
ggtgggttgtatgtgtgtatgaacacattcctgggctttggaagagaacacgtggagaga
cattaccgtaaaactggacagagcgtgtacatgcacttaaaacgtcatgtgaaggagaaa
gccacaggtgctgctgggggtgccgtgccaagaagacggaatggaaaagtatttttagat
ttagaacttaaccgtgactttaacggggatgattttgaatatgaagacgaagccaagctt
gtcatattcccagaccactatgagatccctttaccaaatatcgaggagttgcctgccctg
gtgacaattgcttgtgatgcaatacttaacgctgcttctgcatataaaaagcaagaacaa
gattcatgggaggaggagcttcaagtgtccaagcatgccagaagcctcagacaacaagag
aacggggttcggattcctcccagtggctggaaatgtgccaagtgtgaaatgcgagagaac
ctgtggctgaacctgacagatggctcggtcctctgtgggaaatggttcttcgatggaagc
ggcgggaacggacatgccctcgaacactacaaagaaaccaaattcccacttgcagtcaag
ctagacaccatcaccccagatggagcagatgtttactccttcgatgaagaagaggcagta
cttgaccctcacatagcagaacacttgacacacttcggaatagacatgctaaagatgcaa
aggacggagaatggccaccacacagacaatcatgtgcagcctcgagccactgagtgggag
gtgattcaggaatcaggccttaagctgaaggcagtctatggttcagggtacacaggcctc
agaaacctgggcaacagctgctacctcagcaccactatgcaagtgctcttcagtatccct
gagttccagagagcgtatgtcggtaatctacagagaatatttgactactcgccccttgat
cctactcaagacttcagcacacaaatggcaaaactgggtcatggactactttcaggccag
tattccaaaccaccaatcaaatcagaactcattgaacaggtgatgaaagaagagtacaag
cagcagcacagagggatttcccccagaatgttcaaggctctggtcagcaaaggccaccca
gagttctcctcaaatagacagcaagatgcccaagaattctttttgcattttatcaacctg
gtagagaggaacagttctggctcagagaaccccagcgacgtgttccgcttcatcgtggag
gagcgtgtacagtgctgccagtcacagaaagtgcgttacactcaaagagtggactacctt
atgcagcttcctgtgcccatagaggctgccaccaacagggaagagctcatagcatatgag
actaagcggaaggatgctgaaaaaaacttacgggctcctccagatccagtgagggcccgc
attcccttcactgcctgtctacaagcctttaatgaacctgagaatgttctggacttctgg
agttcggcactgcaggccaagtcggctggagtgaaaacttctcgttttacaactttccct
gaatacatggttgtacagctcaaaaaattcacatttggagtggactgggttccaaaaaag
ttagatgtttctgtagacatgcctgactttatggacttgaatcggttccgggctacaggg
ctccaagcaggtgaagaagagctccctgaccttacgcctcctattgtcattcctgaggac
ataagagacagctcagtgaataattctttggaatctcccgaaatagatgaggcctctgtg
atgcagttggcagaaatgggcttccctctggaggcctgccggaaggctgtgtactacact
gggaacatgggagctgaaatggcatttaactggatcattgctcacatggaggagccagac
tttgctgagcctcttgcgattccttcatatatggaggcagacctgcccagtgccagcttt
cctactgtcagccctctggataaccagcctcctgaagaaagcatctcaatcctcacttcc
atgggcttccccagacatcacactattcgagcgctgaaggccacgaataataacctggag
cgggctttagattggatctttactcacccagagagcgaggaggagagcgaggccatgtcc
gacatggtcgacacagagcccaatgataccagtttctcaaatgccaacacgcacagtgac
tccacgctgtccccggagcaggaaatgtctagtccacgtgttcgagacggccctggacgg
tatgaactctttgccttcataagtcacatgggaacatcaacaatgtctggtcattatgta
tgccatatcaaaaaggaaggaagatgggtcatttacaatgatcatagagtatgtttgtca
gaaagtcctccaaaagacttgggttacatttacttttaccggcgcctgcccagctgctag
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