Ictalurus punctatus (channel catfish): 108274478
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Entry
108274478 CDS
T04658
Name
(RefSeq) beta-hexosaminidase subunit alpha isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00511
Other glycan degradation
ipu00513
Various types of N-glycan biosynthesis
ipu00520
Amino sugar and nucleotide sugar metabolism
ipu00531
Glycosaminoglycan degradation
ipu00600
Sphingolipid metabolism
ipu00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ipu00604
Glycosphingolipid biosynthesis - ganglio series
ipu01100
Metabolic pathways
ipu04142
Lysosome
Module
ipu_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
108274478
09103 Lipid metabolism
00600 Sphingolipid metabolism
108274478
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
108274478
00531 Glycosaminoglycan degradation
108274478
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
108274478
00604 Glycosphingolipid biosynthesis - ganglio series
108274478
00511 Other glycan degradation
108274478
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108274478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ipu03110
]
108274478
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
108274478
Chaperones and folding catalysts [BR:
ipu03110
]
Intramolecular chaperones
Others
108274478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
YozE_SAM_like
Motif
Other DBs
NCBI-GeneID:
108274478
NCBI-ProteinID:
XP_017340160
Ensembl:
ENSIPUG00000022111
UniProt:
A0A2D0SD35
LinkDB
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Position
14:15266571..15274920
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AA seq
525 aa
AA seq
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MNRLYFIFLLLVSVKLKQVYGVWPMPQRFTQSNERYVLNPHLFTYNYANGSAAQVGCSVL
DAAFKRYFRIIFPDFSDGTGFSNTWSEPKPFTVSVSVRSGGCEEYPDEGSDESYNLSVSA
GQAVLRAESVWGSLRGLESFSQLVYQDDYNSYFVNKTEIEDFPRFLFRGLLLDTSRHYLP
VHFILKTLDAMAYNKFNVFHWHIVDDPSFPYQSHTYPDLSNKGAFHPVTHIYTQTDVRKV
IAHARFRGIRVVPEFDSPGHTQSWGKGQPDLLTPCYKKTVPSGTFGPINPTLSSSYQFMN
SLFKEVTSVFPDSFVHLGGDEVDFTCWKSNPKVQAFMTKMGFGHDYTKLQSFYMESIMNI
TAAFNKTSIVWQDVFDYHKRRRAQYVVEVWKRGCYLCKVRQVAKAGLKVILAAPFYLDLP
GPTHDWARYYIVRPLSFKGTEQQKKLVIGGEVCMWGEYVDATNLSPRLWPRASAAAERLW
SNEEQTSSVDKAFPRLQDFRCKMIRRGIQAEPLFIGYCKHEYIGL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtttgtattttatcttcttgctgcttgtttctgttaaactaaagcaggtatat
ggagtgtggcccatgccgcagcgcttcacgcagtctaatgagcgctatgttttaaaccct
cacctgttcacttataactacgcgaacggttcagctgcgcaagtcggatgctctgtcctg
gatgctgccttcaaaagatacttcaggatcattttccccgacttttcagatggaacagga
ttcagtaatacttggtctgagcccaaacccttcacagtatcagtgagtgtcagaagtggt
ggatgtgaagaataccctgatgaaggttcagatgaaagttataacctgagtgtgtctgca
ggtcaagcagttttaagagcagagtcagtgtggggatccctgagaggtctggagtccttt
agtcagctggtataccaagatgattataactcatattttgtcaataaaacagaaattgag
gacttcccacgatttctgtttagagggcttttgctggacacatcaagacactatttacca
gtacattttatactgaaaactctggatgccatggcttataataaattcaatgtatttcac
tggcacattgtggatgatccttctttcccttaccagagccacacttatcctgatttgagc
aacaagggagcctttcaccctgtgactcacatttacacgcagacagacgtgaggaaggta
attgctcatgcaagattccgaggaatcagggtggtgccagagtttgattctcctggacac
actcaatcgtggggtaaaggacagccagacctgctgacgccctgctacaagaaaactgtt
ccctctggaacatttggccccatcaacccaactctgagctccagttaccagttcatgaac
agcctctttaaagaggtaacttctgtatttcctgactcctttgttcaccttgggggcgat
gaggttgacttcacatgctggaaatcaaatccaaaggtacaggcatttatgacaaagatg
ggctttgggcatgactacaccaaactgcagtccttctatatggaaagtattatgaacatc
actgctgccttcaacaagacctccattgtttggcaggatgtttttgattaccacaagcga
agaagggctcagtatgtagtggaggtgtggaaaagaggatgctacctgtgtaaggtgcgc
caagtggctaaggctggactgaaggtcatcctggcagcaccattctatctggacctgcct
ggacccacacacgactgggctcgctactacatcgtgcgtcccctctcctttaagggcaca
gagcagcagaagaagctggtgattggtggtgaggtctgcatgtggggagaatatgtggat
gcaaccaatctcagtccacgcctatggcctagagcgagtgcagctgctgagaggttatgg
agtaatgaagagcagacatctagtgttgataaagcctttcctcgcctacaggacttccgc
tgtaaaatgataagacgtggcattcaagcagaacctctatttataggatactgcaaacat
gagtatatcggtctgtag
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