Ictalurus punctatus (channel catfish): 108274995
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Entry
108274995 CDS
T04658
Name
(RefSeq) DENN domain-containing protein 5B isoform X1
KO
K20164
DENN domain-containing protein 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108274995
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
108274995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
RUN
uDENN
dDENN
PLAT
Sp-DndD
Motif
Other DBs
NCBI-GeneID:
108274995
NCBI-ProteinID:
XP_017340991
Ensembl:
ENSIPUG00000016271
UniProt:
A0A2D0SEU3
LinkDB
All DBs
Position
14:complement(1764965..1786226)
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AA seq
1352 aa
AA seq
DB search
MSASTTASCRFAHYFVLCGLDTDTGLEPDALAALYQWLEADRQGRDPEAETAGENFDQSP
LKRTFKSKVLAHYPENIACNPFDQDAVNMLCMPKGLSFRTQKDSLSPKFHSFLITREDGS
RTYGFVHTFYEEVTSTQIRSAMQTLHQMHHAERASSNACPSSSSSSSSSSMDSLTSSSDE
AESLSSACSASQRCCSSSSYDAEQDTLYVSKALCLITPMPFMHACQRFLSQLHRAVTAQQ
PPPLPLESYVHNVLYEVPLPPPGRSLKFHGVYEPIVCQRPGPAELPLADFPLGEAFRLLG
VENLVQLFTCVLLEMQVLLYSQDYQRLMVVAEGITTLLFPFQWQHVYVPILPASLLHFLD
APVPYIMGLQSKEGTERSKLELPQEANLCFVDIDNHCLELPEDFPQFPNKAEFIQELSEL
LLSYGLRLEGGAPSPPPSSTRARVTGPEALRDLVDDGRNGNLPLDVADLLQGNPTLERLQ
ALAKRTGVKVARLEELVAGQRALVVEENMAASRTGIEEEELRNAKLNVQLREVFAARFVA
MFADYEAFVIQNSPDLESWLSNREQMHNFDKASFLSDQPEPYLPFLCRFIETQMFATFID
NKILSQWEEKEPLLRVLDGRIEKARLYNVRAPNLRSSVYQRCTFLDESAQAIEQRLMKID
HTAIHPHLLDMKIGQGKYKQGFFPKLQSDVLASGPTNNRWSNRAGAAQRRRDWHRPQTDH
LGLDNDLKEPVEGCSGVQSSTASSEWVRAPSRRVKPPTKSFSTCSLKYMQEARSLGKNLR
QPKLSDLSPAVIAQTNSKFVEGLLKECKMKTKRMLVEKMGREAVALGHGEANITGLEENT
LIASLCDLLERIWSHGLQVKQGKSALWSHLRHYQDRVEKMEQQAESSVSPGQEKRKSESS
TGLSVLRASVVQDMRHIQNMGEIKTDVGRARAWIRLSLEKKLLSQHLKQLLSNQAITKKL
YKRYAFLRCEEEKEQFLFHLLSLNTVDYFCFTSVFTTIMIPYRAVIIPIKKLSNAMTTSN
PWVCVSGELGDSGVMQIPKNVLEMTFDSAFRAHTHLSIPFKCQNLGKLTTVQLGHDNAGL
LAKWLVDCVLVRNEITGHTYKFPCGRWLGKGVDDGSLERILIGELVVPCTDEETGRGSKT
PPPQRSPSQIRRISISSITGRGSKPTTDQIQEAISDAVNNIVKHFHKPEKERGSLTLLLC
GEGGLVGALEQFFYHGFRTARLFQKSVFLWDFIERSVMYMESSDRTGDLRRPAERIGSSC
NSLCRYANAINNTSRSLGKDGKFQLLVCLGARDRLLPHWLPLLVECPIIVRMYEETALLR
DNLAVNLLISVLHSLHDFRVTLETSLTKGVEL
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgagcacaacggcgtcgtgtcgcttcgcccattacttcgtgttatgtggactg
gacacggacacgggcctcgagcccgacgccttagccgctttgtaccagtggctagaggca
gatcgtcagggcagagacccagaggctgagactgcaggcgagaactttgaccagagtcct
cttaaaaggaccttcaaatccaaagtgctggctcactacccggagaacatcgcgtgcaac
ccttttgaccaggatgccgtcaacatgctctgcatgcctaaaggcctgtcgttccgcact
cagaaggactccctgtcccccaagttccactcgttcctcatcacgcgtgaggacggctct
cgcacctacggtttcgtacacaccttctacgaggaggtgaccagcactcagatccgctcg
gccatgcagacgctgcaccagatgcaccacgcggagcgcgcctcttcgaacgcctgccct
tcatcctcctcctcctcgtcctcctccagcatggactcgttaaccagcagctcggacgaa
gccgagtctctgtcctccgcctgttccgcgagtcagcgttgttgcagctcctcaagctac
gacgccgagcaggacacgctgtacgtctccaaagcgctgtgcctgatcacgccgatgccc
ttcatgcacgcgtgccagcgcttcctgtcccagctgcacagggcggtcacggcccagcag
ccgcctcctctgccgctggaaagctacgtgcacaacgtgttgtacgaagtcccgctgccg
cctcccggacgctccttaaagttccacggcgtgtacgagcccatcgtgtgccagcggcca
ggaccggcggagctgccgctggcagattttcctctgggcgaggcttttcggctgctgggc
gtcgagaacctggtgcagctcttcacctgcgtcctgctcgagatgcaggttctgctttac
tcacaagattatcagaggctgatggtggtagcagaggggatcactacgctcctctttccg
ttccagtggcagcatgtgtacgtgcccatcctgcctgcttccctgctgcactttctcgat
gcccccgtgccctacatcatgggcttacagtcgaaagagggcacggagcgctccaaactg
gaactgcctcaagaggcgaacctttgcttcgtggacattgacaatcactgcctggagctg
cctgaggatttcccacagttccccaacaaggccgagttcatccaggagctgagcgagctg
ctgctgagctatggcctgcgtctggaagggggcgctccctcgcctccgccgtcctccact
cgggcacgcgtgactgggcccgaagccctgagagacttggtagacgacgggaggaacgga
aatctgccgctagatgttgcggacctgctgcagggaaacccgactctggagcgccttcag
gctctagccaagcgcacgggggtgaaggtcgcacgtctggaggagctggtggccggacag
agggctctggtggtggaggagaacatggcggcatcgaggaccggcatcgaggaggaggag
ctgaggaacgccaagctaaacgtgcagctgagagaggtgttcgccgctcgcttcgtcgcg
atgttcgccgactacgaggcgttcgtcattcagaactcgccagacctggagtcgtggctc
tccaaccgggagcagatgcacaactttgacaaggcttccttcctgtcagaccagccagag
ccatacctgcctttcctgtgccgcttcatcgagacccagatgttcgccaccttcatcgac
aataaaatcttgtcccagtgggaggaaaaggagcccctgctgcgcgtgctcgacggacgc
atcgagaaggcccgcctctacaacgtgcgcgcgcccaacctgcgctcctccgtctaccag
aggtgcaccttcctcgacgagtccgctcaggccattgagcagcggttgatgaaaatcgac
cacacggccattcatccacacctgttagacatgaagatcggccaaggcaaatacaagcag
ggcttcttccctaagctgcagtcggacgtcctcgcctcaggcccgaccaacaacaggtgg
tctaatcgcgccggcgcggctcagcggaggagggactggcacagaccgcagacggatcac
ctcgggctggacaacgacctcaaagagccagtggaggggtgttcgggggtgcagagctct
acggcttcctcggagtgggtccgggcaccgagccgtcgcgttaaaccacccacaaagtcc
ttctcaacctgcagtctgaagtacatgcaggaggcgcgtagcctggggaaaaacctgagg
caacccaaactgtctgacctttccccagcggtcatcgctcagaccaactccaagtttgtg
gagggcttactgaaggaatgcaaaatgaagactaagcggatgttggtggagaagatgggt
cgagaggccgtggcgctcgggcacggagaggctaacatcaccggcctggaggagaacacg
ctcatcgctagtctgtgtgacctgctggagaggatatggagccacggcctgcaggtcaaa
cagggaaagtctgcattatggtcccatttaaggcattaccaggacagagtggagaagatg
gagcagcaggcggagtcctcagtgtctcccgggcaggagaaacggaagtcggagtcctcc
acgggattgtcagtactgcgcgcgtcagtcgtgcaggacatgaggcacatccagaacatg
ggcgagatcaagacggacgtagggagagcacgagcctggattcgtctgtccctggagaaa
aagctgctgtctcagcacctcaagcagctgctttctaaccaagctataaccaagaagctg
tataagcggtacgccttcctgcgctgtgaggaagagaaggagcagttcctcttccacctg
ctgagtctgaacacggtggactacttctgcttcaccagcgtcttcaccaccatcatgatc
ccgtatcgcgccgtcatcatcccgatcaagaagctgagcaacgccatgaccacctcgaac
ccctgggtgtgcgtgtcgggagaactgggcgactcgggcgtcatgcagatcccgaagaac
gttctggagatgacgttcgattctgcctttagggctcacacgcacctctccatccccttc
aagtgccagaacctggggaagctgaccaccgtgcagttgggccacgacaacgccggactt
ctggccaagtggctggtggactgcgtgctggtgcgcaacgagatcacaggacacacgtac
aaattcccttgtggtcgctggctggggaaaggcgtcgacgacggcagtcttgaacgaatc
ctgatcggcgaattggttgttccgtgcaccgacgaggagacggggcgaggctccaagacc
ccgccccctcagcgctcgccctcacaaatccgtcgaatcagcattagttccatcacaggc
cgaggcagcaaaccaacgaccgatcagatacaggaagccatcagcgacgcggtgaacaac
atcgtgaaacatttccacaaaccagagaaggagagagggagtctgactcttctgctgtgc
ggagagggcggtctggtgggagctctggagcagttcttctatcacggcttccgcaccgct
cgtctcttccagaagagcgtctttctgtgggacttcatagagaggtcggtgatgtatatg
gagagttctgatcggacgggcgatctgcggcgaccggccgagcgcatcggttccagctgc
aactctctttgtcgctatgccaacgccatcaacaatacctcacgcagcttgggcaaagac
ggcaaattccagcttctggtctgccttggggcaagagatcggttgctgcctcactggctc
cccctgctggtcgagtgtcccatcatcgtgcgtatgtatgaggaaacggcgttgctgcgt
gacaatctcgccgtcaaccttctcatcagcgtcctgcattctctgcacgacttccgtgta
actctagagacctccctcaccaaaggggtggagctatag
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