KEGG   Ictalurus punctatus (channel catfish): 108275779
Entry
108275779         CDS       T04658                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03250  Viral life cycle - HIV-1
ipu04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108275779
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    108275779
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108275779
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     108275779
SSDB
Motif
Pfam: SAM_2 HD SAM_1 PDEase_I HD_assoc_2
Other DBs
NCBI-GeneID: 108275779
NCBI-ProteinID: XP_017342242
Ensembl: ENSIPUG00000014401
UniProt: W5UKK8
LinkDB
Position
15:23487712..23505393
AA seq 626 aa
MDSRKRPREEPLCVESLKTPVKQIVTGQPRKEDGNFKHWDTEEICSYLRQHGLGEWEQKF
REQKITGVGLRYLTDVQLEKIGIEPLGSRLQILHCFRKLWQISFDRMKVFNDPIHGHIEL
HPLLVAIIDTPQFQRLRHIKQLGATYMVFPGAAHNRFEHCIGVGYLAGCLVQALNDRQPE
LLITKQDILCVQIAGLCHDLGHGPFSHMFDGMFIPKVRPGLKWKHENASVEMFDHMVKVN
NLEGVMEEYGFSLPTDLIFIKEQIAGPLDSASLGNEWAYKGRSEEKSFLYEIVANKRTGI
DVDKWDYFARDCYHLGIQNNSDYRRFLKFARVCDVKGKKHICTRDKEVGDLYDMFHTRNC
LHRRAYQHKVGNIIEVMITEALEKADPYIKIQGTLGKTYRISEAIEDMEAYTKLTDHIFE
QILYSSDPALSEAQAILQNILHRRLYKCVGQTTPNRHYEMSQEMLCEWSREVSECKPLGN
EVDLMPEDFIVSVIYMDYGMKEKNPVNNVYFYCKNDPTKAIKIHKNQVSKLLPEQFAEQL
IRVYCKKTDEKKLEAAKKYFVQWCMNRNFSKPQDGDVTAPELTPLKLDWQNEDDEEGDND
FRGRGRINGGKTVKTNLFHSPKEKPI
NT seq 1881 nt   +upstreamnt  +downstreamnt
atggacagccgaaaacgcccgagagaagagccgctgtgcgtggagagtttgaaaacgccg
gtcaagcagattgtaaccgggcaaccacgtaaagaagatgggaattttaagcactgggac
accgaggaaatctgctcctatcttcgccagcacggactcggagagtgggagcaaaagttc
agagaacagaagataacaggagtcgggctgcgttatctcactgatgtacagctggagaag
atcggcatagagcccctgggctccaggctgcagatcctccactgcttcaggaaactctgg
cagatctcgtttgatcgcatgaaggtgttcaacgatccgattcacggccacatcgagctc
catcctctgctggtggccatcatcgacacgcctcagttccagcggctgcggcacatcaaa
cagctgggagccacgtacatggtgtttcccggagccgcacacaaccgcttcgaacactgc
ataggcgttggatatttagcgggttgtctcgtccaagctctgaacgacagacagcccgag
ctcctcatcaccaaacaggacatcctgtgtgttcagatcgccgggttgtgccatgacctg
ggtcacggtcctttttcccacatgttcgacggaatgttcattccgaaggtccgacccggc
ctgaaatggaagcacgaaaacgcatcggtggagatgttcgaccacatggtgaaagtgaat
aatctggagggagtgatggaggagtacggtttctctctccccaccgacctcatcttcatc
aaagagcagatcgccgggccgctggactccgcctccttgggcaacgagtgggcgtacaag
ggcaggtcggaagagaaatccttcctgtacgagatcgtagctaataagaggaccggcatc
gacgtggacaagtgggattattttgcaagagactgctatcacctcggcatccagaacaac
tccgactaccgtcgcttcctcaagttcgcccgagtgtgtgacgtgaagggcaagaaacac
atctgcaccagagacaaggaagtaggtgatttatacgacatgtttcacacacggaactgt
ctgcatcgccgagcctaccaacacaaagtgggtaacatcatcgaggtcatgataacagaa
gctctggagaaggctgatccgtacattaagattcagggcactttagggaagacgtaccga
atctcggaagccatcgaggacatggaggcttacaccaaactcacagatcacattttcgag
cagatcctgtactcgtctgatccggcgctgtctgaagcccaggccatcctgcagaacatc
ctccacagacgtctgtacaaatgcgtggggcagaccacgcccaatcgtcactatgaaatg
tcacaggagatgttgtgcgagtggtctcgcgaggtgtcggagtgtaaacctttgggtaat
gaggtggatttgatgcccgaggacttcatagtgagtgtgatttatatggattacggaatg
aaggagaagaatcccgtgaacaacgtttacttctactgcaagaacgacccgactaaagcc
atcaagatccacaagaaccaggtgtccaagctgttgccggagcaatttgccgagcagctg
atcagagtttactgcaaaaaaacggacgagaagaaactggaagcggcgaagaagtacttt
gtgcagtggtgcatgaacagaaatttctccaaaccgcaggatggtgatgtcacggcacca
gagctcactccactaaagcttgactggcaaaatgaagatgatgaagagggtgataatgac
ttcagaggtcgagggaggatcaacggtggaaaaactgtaaaaacaaacctgttccattct
ccgaaagagaaacccatataa

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