Ictalurus punctatus (channel catfish): 108277734
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Entry
108277734 CDS
T04658
Symbol
si:dkey-24p1.1
Name
(RefSeq) B-cell receptor CD22 isoform X4
KO
K06467
CD22 antigen
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108277734 (si:dkey-24p1.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ipu04090
]
108277734 (si:dkey-24p1.1)
04091 Lectins [BR:
ipu04091
]
108277734 (si:dkey-24p1.1)
CD molecules [BR:
ipu04090
]
Proteins
108277734 (si:dkey-24p1.1)
Lectins [BR:
ipu04091
]
I-type lectins (Siglecs)
108277734 (si:dkey-24p1.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
Ig_4
Ig_5
VEGFR-1-like_Ig-like
C2-set_2
Ig_7
C1-set
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
108277734
NCBI-ProteinID:
XP_017346089
UniProt:
A0A2D0SUU9
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Position
17:17348318..17408002
Genome browser
AA seq
1252 aa
AA seq
DB search
MYSVWNSVLSWVLFCLFSSITMEDTRPIVIEEPTTTTTTTNQEGSCVTIKCKYKYQKELK
LLWIKDPKWIEKEKRYDGIIVYSNTDERPQVAEYSNRVEFFNDQSSQWTNCTIKIQDLKK
NDSGNYTFRYIGSDKYISNTFLLTVVDNPCKVHIKPANLNKSLKEGDRVSLQCATSAACE
FHPLWQSSGSSEILKSEQSKDEVEKRSELQLIVSWTDDGRTLTCRPSRSNDNWLERRVTL
RVEYAPTETKVIESSSSKDVKEGEQVTISCSSKARPNANFTWIKHQSSFSRHGENLTLYN
MTPEDGGKFYCLANNEHGSEKSNDIKINVIYAPKGVDINPKLAELKEGDRLTLTCLVQNS
NPEVDMQSYRWYKDGQEINQQTMNTFTVPSVRQRDKGVYQCQARNSVGETMSTNITQVSV
KYHPQNTFIDGTSGIKLGFELNLKCVTEAEPVPHKYSWYFKPEHEQQFVTLSHTDEMYRI
EKVAVSNAGLYKCSAQNDVGKGANSTEKNVFVFYPPKTPNLTMKEVVKEEELYTITCTVE
SSPQANLTLSRSSLTNPEKDIITVQYVQSNILKFAANATVSDAGMYTCEAENTEGKNFSK
NQLKVLYAPKGVDINPKLAELKEGDRLTLTCLVQNSNPEVDMQSYRWYKDGQEINQQTMN
TFTVPSVRQRDKGVYQCQARNSVGETMSTNITQVSVKYHPQNTFIDGRSGIKLGFELNLK
CVTEADPLPHTYSWYFKPEHEQQFVTLSHTDEMYRIEKVAVSNAGLYKCSAQNDVGKGAN
STEKNVFVFYPPKTPNLTMKDVVKEEELYTITCTVESSPQATLTLSRSSLTNPEKDIITV
QYVQSNILKFAANATVSDAGMYTCEAENTEGKTFSKNQLKVLYAPKNVTALADPGVELKE
GSNLTLTCKADSVPEVSAYTWKKSSATHSETVGHGQKITLHFLKSSDSDHYFCISRNEIG
SVKSSSIYIRVKYQPRITLIHNMTSLGLWEKAVPIHLSCNVQCDPPATFFAWYKMEENTT
VLSNNLNYTVEPQNPGTYYCYARNEEGESRSEPVKIFLNHFIIKQLVQVIISLLVIVFLI
GVMFLIRRIILRKRSAQRSFFFSAAPLCFLSNLGSSDSCNNTRENLVIEGSTELSSFRDN
HSVSAVQSNPPANRNIQAGRPNSNILSKQKQHHTEEDLTMTTVNYAMLQFMDNNNPNKSV
PSHDSSGPVYADVSKNKQMAKKPQDGHEHYENVSGVCCEAAISKHKLDLGQQ
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgtattcagtgtggaattctgtcctttcctgggttttgttctgtttgtttagctcaata
acaatggaagatacacgacctatagtcatagaggaaccaacaacaacaacaacaacaaca
aaccaggagggatcgtgtgtcacaattaaatgcaaatataaatatcagaaggaactgaaa
ctgttgtggattaaagatcctaagtggattgaaaaagaaaagagatatgatggaattatt
gtatatagtaatacagatgagcggccacaggtggctgagtactctaacagagtggaattt
tttaatgatcagagcagtcaatggaccaattgcacaataaaaattcaggatcttaaaaag
aatgacagtggaaactatacatttaggtacataggatcagacaaatatataagtaataca
tttcttctcacagtcgtggacaatccctgcaaggtccacattaagccagcaaatctgaac
aagtcactcaaagaaggagacagagtgagtcttcaatgtgcaacatcagcagcctgtgag
tttcatcctttatggcaatcgtctggctcaagtgagattctcaaaagtgagcaaagtaaa
gatgaggtggaaaaacgcagtgagctgcagttgatcgtgagctggacagatgatgggaga
actttgacatgtcgtccttctagaagtaatgacaactggctggagaggagggttacactg
agagtggaatatgcacccacagaaacaaaagtgattgagagctcaagctctaaggatgtg
aaagaaggagaacaagtgacaatttcatgctccagcaaggcccgccctaacgctaacttc
acatggattaaacatcaaagctctttttcccggcatggagaaaaccttactttatataat
atgacaccagaagatggaggcaaattctactgtctggctaacaatgaacatggaagtgaa
aagtcaaatgacataaaaatcaatgttatttatgctccaaaaggtgtcgatatcaatcct
aaattagctgaactcaaagaaggggacaggcttacactcacgtgtctggtgcaaaacagc
aatccagaagttgacatgcagtcctacagatggtacaaagatggtcaagagattaatcaa
caaacaatgaatacattcactgtgccaagtgtaagacagcgtgataaaggagtgtatcag
tgtcaggccagaaattcagtaggagagaccatgtctacaaacattacccaagtatctgtg
aagtatcatccacaaaacacattcattgacggcacaagtggaattaagttggggtttgaa
cttaaccttaaatgcgttactgaggctgaacctgttcctcacaaatattcctggtatttt
aaaccagaacatgaacagcagtttgtcaccctttcacacacggatgagatgtaccggatt
gagaaagtggctgttagtaatgctgggttgtataagtgcagtgcgcagaacgatgtaggt
aaaggagcaaactctactgaaaaaaatgtttttgtgttctatccccccaaaacaccaaat
ctgaccatgaaagaagttgtaaaggaagaagaattatatactataacatgcactgtagaa
agctcaccccaggcgaatctcacgctaagtagatcctctctgacaaacccagaaaaagac
ataatcacagtccagtatgttcagtccaacatactcaaatttgctgccaatgcgaccgtg
tcagatgcaggtatgtacacctgcgaagcggaaaacacagagggaaaaaacttctcaaaa
aatcagctgaaagttttgtatgctccaaaaggtgtcgatatcaatcctaaattagctgaa
ctcaaagaaggggacaggcttacactcacgtgtctggtgcaaaacagcaatccagaagtt
gacatgcagtcctacagatggtacaaagatggtcaagagattaatcaacaaacaatgaat
acattcactgtgccaagtgtaagacagcgtgataaaggagtgtatcagtgtcaggccaga
aattcagtaggagagaccatgtctacaaacattacccaagtatctgtgaagtatcatcca
caaaacacattcattgacggcagaagtggaataaaattggggtttgaacttaaccttaaa
tgcgttactgaggccgatcctcttcctcacacatattcctggtattttaaaccagaacat
gaacagcagtttgtcaccctttcacacacggatgagatgtaccggattgagaaagtggct
gttagtaatgctgggttgtataagtgcagtgcgcagaacgatgtaggtaaaggagcaaac
tctactgaaaaaaatgtttttgtgttctatcctcccaaaacaccaaatctgaccatgaaa
gatgttgtaaaggaagaagaattatatactataacatgcactgtagaaagctcaccccag
gcaacgctcacactaagcagatcctctctgacaaacccagaaaaagacataatcacagtt
cagtatgttcagtccaacatactcaaatttgctgccaatgcaaccgtgtcagatgcaggt
atgtacacctgcgaagcggaaaacacagagggaaaaaccttctcaaaaaatcagctgaaa
gttttgtatgcccctaaaaatgttactgcattagcagatcctggtgtagagctaaaggaa
ggctctaacctgacactcacctgtaaagctgattctgtacccgaggtgtctgcttacaca
tggaagaaatcttctgcgacacactcagagacagtggggcatggacagaaaataacactc
catttcctgaagagctctgactctgaccattacttctgtatctccagaaatgaaattggc
agtgttaagtcctcatcaatatatatcagagtcaagtatcagccacgcataacacttatc
cacaacatgacatcactgggtctatgggaaaaggcggtaccaatccacctgagttgcaat
gttcagtgtgatccaccagccactttctttgcatggtacaagatggaggaaaacaccact
gtcttgtcaaataatttgaactacacagttgaaccacaaaacccaggaacgtactactgc
tacgcacgcaatgaagaaggggaatcaagatctgaaccagtcaaaatatttcttaatcat
ttcattattaaacagctcgttcaggtcatcatctccttactggtcatcgtgtttctgatt
ggtgtcatgtttctgatacggagaatcatcctgagaaaaagatcagcccaacggtcattt
ttcttctccgcagctccattatgttttttatcaaacttgggttcatcggactcatgtaat
aacactagggagaacctggtgatagagggatctacagagctctccagcttcagagataat
cattcagtctctgctgttcaatcaaatcctccagccaacaggaatatacaagcaggaagg
ccaaattctaacattctatccaagcagaaacagcatcatacagaagaggatttaaccatg
accactgtgaattatgctatgctgcagttcatggacaacaacaatccaaataaaagtgta
ccgagccatgacagttctggtccagtctatgctgacgtttcaaaaaataaacaaatggca
aagaaaccacaagatggtcatgaacattatgaaaacgtctcgggtgtgtgctgcgaagcg
gccatttccaaacataaactggatctcggacagcaatga
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