Ictalurus punctatus (channel catfish): 108277866
Help
Entry
108277866 CDS
T04658
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108277866
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108277866
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108277866
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108277866
Peptidases and inhibitors [BR:
ipu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108277866
Ubiquitin system [BR:
ipu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108277866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
108277866
NCBI-ProteinID:
XP_017346351
Ensembl:
ENSIPUG00000002710
UniProt:
A0A2D0SUI2
LinkDB
All DBs
Position
17:complement(2814331..2822638)
Genome browser
AA seq
803 aa
AA seq
DB search
MGKKRAKDRGRSPKEDSSVDLAGVTCTHIRKGTDPSWLRKTSLDKSWDACETCEQEKETE
NEDEDKQDTAGIWMCLKCGHRGCGRFSENKHAIKHYETPRSDPHCLVLSLDNWNVWCYIC
DDTIYYSSTGQLAQLVSNIKKQMLAESRHKTATRKAKEEKNTSADTVQEHEVVKEPEKKE
EPKENKKCVKRNGQETQSSGVPVRGLSNLGNTCFFNAVLQNLSQTWLLRQLLSDFRDEEK
SVLITPSPSSELDPLQVRLPRPGSLTLAMCQLLNEIQETKKGVVTPRELFTQVCKKAARF
KGFQQQDSQELLRYLLDGMRAEESIRVTAGILNVLKSSGKTSEPEQKKLVKEYDSNGGTK
SFVERVFGGELTSTVMCTECKTVSVVTEVFLDLSLPVADEAYRKKKGGGDQQKKSESMES
GRSVEAPLTNGIEDMPMGTGSKYQQKKAKKQAKKQAKTQRRQQKQGTKLTLDLLTNQSED
ASLEAPPPSTDEQPEAEGGANEPVSQLEPAEQDQNRETPEGDEEGSEAQNSASNRFITLS
EEGTEKQEADEEDENDEAELSKSVRALSISEDQRSKEVGSGAESEPEELGAEPEFVVVVN
ADPKAAFSTLSSRAALSASESSVESSLLQFTQVEQLTHTNSLLCLTCSQRAAHGGKKKVY
TEALKQMLISSPPPVLTLHLKRFQQVGYSVCKVNRHVQFPQVLDLGPFCSAKCKGVEEGQ
TQLLYSLYGIVEHSGTMRSGHYTAFVKARPHTPARIGSLNGASGDEVPPKGSWFHISDSS
VQSVTEARVQTSQAYLLFYERIS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagcgagccaaagacagaggcaggagtcctaaagaggacagctctgtcgac
ctggcaggtgtgacgtgtacgcacatccgtaaaggaacggacccgagctggctgaggaag
acgagcctggacaagagctgggacgcttgcgagacgtgcgagcaggagaaagagaccgag
aacgaagatgaagacaagcaagacacagcggggatatggatgtgtctcaaatgtggacac
agaggttgtgggaggttctcagagaacaaacacgccattaaacactacgagacgccgcgc
tcggatccgcactgcctggtgctcagcctggacaactggaatgtgtggtgttacatctgt
gatgacactatctactactccagcacgggacaactggctcagcttgtctccaacatcaag
aaacaaatgctggccgaatcccgacacaaaactgccactaggaaagcgaaggaagagaag
aacacttcagctgacaccgtgcaggaacacgaggttgtaaaagagccggaaaagaaagag
gagccgaaagaaaacaagaagtgtgtgaagcgaaatggccaggaaacgcaatccagcggc
gtgcccgtgcgaggcctcagcaacctcggcaacacgtgcttcttcaacgctgtgctgcag
aatctatcgcagacttggctgctgcgtcaactcctcagtgacttcagggacgaagaaaag
agtgtgttgatcacaccatcaccatcctccgaactagatcctttgcaggtgcggttgccg
agacccggctctctcaccctggccatgtgccagctgctcaatgaaatccaggagaccaaa
aaaggcgtggtgacaccgcgtgagctcttcacacaagtgtgtaaaaaggcagcaagattc
aaaggcttccagcagcaggacagtcaggagctcctgcgttacctgctggacggaatgaga
gccgaggagagcatcagagtaactgccggaatcttgaacgtgctgaaaagttcggggaaa
acctccgagccggagcaaaagaaattagtcaaagagtacgacagcaatggcgggacgaag
agttttgtggaacgcgtgtttggcggagagttgaccagcactgtgatgtgtacggagtgt
aagacggtttccgtggttaccgaagtgtttctcgacctctctctacctgtggctgatgag
gcttacaggaaaaagaaaggtggcggcgatcagcagaagaagagcgaaagcatggaaagt
gggcggagcgtcgaggctccactgactaatgggattgaagatatgccgatgggcacggga
agcaagtaccagcaaaagaaagccaagaagcaggcgaagaaacaggctaagacccagcgg
cgtcagcaaaagcaaggcacaaagctcacgttggatttgctgaccaatcagagcgaagac
gcttctctggaggccccgcctccgagcacggacgagcagccggaagctgaaggtggagcc
aacgagcccgtgagccagttggagccggcggaacaggatcagaatcgggagacgcccgaa
ggagatgaagaagggagcgaagcgcagaactccgcctcgaatagattcatcaccctatca
gaagaggggacggagaaacaggaagcggacgaggaagacgagaacgacgaggcggagcta
agtaagagcgtgagagcgctgtcgatctccgaggaccagcggagcaaagaggtgggatca
ggagcggagtcagagccggaggagttgggggcagagccagagttcgtggtggtggtgaac
gcagacccgaaggccgcgttctcaactctgtccagcagggcggcactgagcgcctcggag
agctccgtggagtcgagcctccttcagttcacacaggtggagcagctgacgcacaccaac
agcctgctgtgtttaacgtgcagccagagagccgcacacggcggtaaaaagaaggtgtac
accgaggcattgaagcagatgctgatctcgtcccctcctcctgtactcactctgcacctg
aagaggttccagcaggtgggctacagtgtgtgtaaagtcaacaggcacgtacagtttcct
caggtgctggatctcggcccgttctgctctgccaagtgcaagggggtggaggaaggacag
acgcagctcctctactctctgtacggtattgtggaacacagcggcaccatgcgctcgggt
cattacacagcgttcgttaaagcccgaccccacacacccgctagaatcggttcgctaaac
ggagcatcaggtgacgaggtgccccctaaaggctcctggttccacatcagcgacagcagt
gtgcagtcggtcaccgaggcccgagtgcagacttcccaagcttacctgctcttttacgag
aggatctcttaa
DBGET
integrated database retrieval system
