Ictalurus punctatus (channel catfish): 108279223
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Entry
108279223 CDS
T04658
Name
(RefSeq) protein ERGIC-53 isoform X1
KO
K10080
lectin, mannose-binding 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108279223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108279223
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ipu04091
]
108279223
Membrane trafficking [BR:
ipu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
108279223
Lectins [BR:
ipu04091
]
L-type lectins
108279223
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Lectin_legB
V-SNARE
Cytochrom_B562
COG3_N
GCN5L1
Motif
Other DBs
NCBI-GeneID:
108279223
NCBI-ProteinID:
XP_017348779
Ensembl:
ENSIPUG00000016515
UniProt:
A0A2D0T1I9
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Position
18:8078228..8089189
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AA seq
502 aa
AA seq
DB search
MAVSMAKLLAAQRCLLLVSVLFHCSVRCETATEEPPHRRFEYKYSFKGPHLTQSDGMIPF
WVHTGNAIPSADQIRITPSLRSQRGSVWTKTPVNFEHWEAEVAFRISGRGRTGADGLAIW
YTQDQGLEGPVYGAADQWNGLGIFFDSFDNDGKKNNPAILVVGNNGKLIYDHQNDGSTQA
LGTCLRDFRNKPYPVRAKVTYYRKTLTVMINYGFMPGKDDYEFCAKVENMVIPSTGYFGI
SAATGGLADDHDVLSFLLFRLTEPGQNLPPPEQEIPKEEQDKYQEEFQNFQQELDKKKEE
FQKEHPDVHGQPMEDLYESVSDREIRQVFEGQNQIHMEIKQLNRQLAMILDEQRRYVSVI
TEEISKRSGQAQSGQGPSQESDTIITNQQEVLRNLNELRNSFSVVVQQLSAAQQGNAGAL
GTYETIQHFNDIKEHLHVVKRNVEHIIQRNAAPAEKQKCPEPPPPPCLSTAHFVIFVVVQ
TLLFFGYAVYKSQKEAAAKKFF
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccatggcgaagctcctggctgcacagcgatgtctgctcctcgtttcagtg
ctgtttcactgctcggttcggtgcgaaacagcaaccgaggagccgccgcatcgccgcttc
gagtataaatacagctttaaaggtcctcacctgactcagagcgacggaatgatcccgttt
tgggttcacactggcaatgcgatcccaagtgccgatcagatccggatcacaccatctctt
cgcagtcagagggggtcagtttggaccaaaactcccgtgaacttcgagcactgggaggcc
gaggtggcgttccgtatatccggacgagggagaaccggagctgacggactggccatatgg
tacacacaggatcagggtctggagggtccagtgtacggagctgctgatcagtggaacggc
ttgggaattttcttcgactcctttgacaatgacgggaagaaaaataatccggccatcctc
gtcgtgggaaacaacggcaaacttatttacgatcatcagaacgatggttcgacccaagcc
ctgggcacctgcctccgagatttcaggaataaaccatatccggtccgagccaaagtcacc
tactacaggaagacgttaacggttatgatcaattacggattcatgccggggaaggacgat
tatgaattctgtgccaaagtggaaaacatggtcattccgtccaccggatatttcggcatt
tcggctgctacaggaggacttgcagatgaccatgatgtcctgtcgttcctgctgttcaga
ttaaccgagcccggacaaaacctgcctccacctgaacaagagattcccaaagaggagcag
gacaagtaccaggaggaatttcagaatttccagcaagagctagacaaaaagaaagaagag
tttcagaaggagcaccccgacgttcacgggcagcccatggaggatctgtacgagagcgtg
agcgaccgtgagatccgtcaggtgttcgagggtcaaaaccaaatccacatggagattaaa
cagctgaaccggcagttggccatgatcctggacgagcagcgccgctacgtctctgtcatc
accgaggagatctccaaacgctcaggacaggcccagtcggggcagggtccgagtcaggaa
tcggacacaataatcacgaatcagcaggaagtcctgcgcaacctcaacgagttaagaaac
agtttttcagtggtggtgcagcagctgagtgcagcacagcagggaaacgcaggcgctttg
ggcacgtacgagacgatccaacactttaacgacatcaaagagcatctacacgtcgtcaag
aggaacgtcgagcacatcatccagagaaacgcggctccagcggagaagcagaaatgtccc
gagccgcctcctccaccctgtctctccacagcgcacttcgtcatcttcgtcgttgttcag
acgctgctgtttttcggatacgccgtgtacaaaagccaaaaggaagcagcagcgaagaaa
ttcttttga
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