Ictalurus punctatus (channel catfish): 128628661
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Entry
128628661 CDS
T04658
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
128628661
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128628661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
Prok-RING_4
PRP1_N
TRAF3_RING
zf-ANAPC11
U-box
Zn_ribbon_SprT
DUF6591
Fib_alpha
Phage_HK97_TLTM
Exonuc_VII_L
Mt_ATP-synt_D
DUF4407
Motif
Other DBs
NCBI-GeneID:
128628661
NCBI-ProteinID:
XP_047017396
UniProt:
A0A979FB15
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All DBs
Position
17:complement(20594985..20608240)
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AA seq
550 aa
AA seq
DB search
MAEASISVDQDRFICPVCLDHLKDPVTTPCGHNFCKVCINGFWDQEDVKGVYSCPQCRET
FTPRPVLRRNNMLAEMVEKQNKTELQAVSPAHCYAGPGDVACDFCTGRKRKAINSCLVCQ
ASYCEDHLKPHLEGPAFKKHKLVEAFLELQEKICSEHDKLIEIYCRTDQSFICYLCTMDK
HKGHDTVSTKAERTEKQNEVKEEQMKSQQRIQEKQKKVQELKQTVDTIKMRSQAAVDESE
GIFTELISSMEKKRSEVKELIRAQEKAELSRAEQLLKQLEQEIADLKRRVTELEQLSHTH
DHIHFLQCFPSLCVSPGSEDSPSFTVNQHLSFVGVRKSLSNLKQQVEKICEEEFNKIRPQ
AVVLQKSREDLLRYFCYLILDPNTVHRRLILSEKNRVVKRNRTEQPYPDHPERFDSWTQV
LCKESLCGRCYWEVEWSGDVSISVSYKEISRKGGANECLFGYNNQSWSLQCSPSSVAFWH
NKIKTELRGPASSRIGVYVDHSAGTTLSFYSISDTMRLLHRVHTTFSHPHPLYAGFCVGN
NSILRLCDLK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagtatttcagtagatcaggatcggttcatctgtccagtgtgtctagat
catctgaaggatccagtgactacgccctgtggccacaatttctgtaaggtgtgtattaat
ggcttctgggatcaggaggatgtgaagggtgtctacagctgtccccagtgtagagagact
ttcactccaaggcctgttctacgcaggaacaacatgctggctgaaatggtggagaaacaa
aataagactgaactccaagctgtttctcctgctcactgttacgctggacctggagatgtg
gcgtgtgatttctgcaccgggagaaaacgtaaagccattaattcctgtctggtgtgtcag
gcctcctattgtgaagatcatcttaaacctcacttagagggtcctgcctttaagaagcac
aagttagtcgaagcctttctagagctccaggagaagatctgctctgagcatgacaaactc
atcgagatctactgtcgtactgaccaaagcttcatctgttacttgtgtacgatggataaa
cataaaggccatgatacagtttcaactaaggcagaaagaactgaaaaacagaatgaggta
aaggaggagcagatgaaatcccagcagaggatccaggagaagcagaagaaggtgcaggag
ctgaaacagactgtggacactattaagatgcgttcacaggcagcggtagatgagagtgag
gggatctttactgagctgatcagctccatggagaaaaagcgctcggaggtgaaggagctg
atcagagctcaggagaaagctgaattgagtcgagctgaacaactcctgaagcaactggag
caggagattgctgatcttaagaggagagtcactgagctggagcagctttcacacacacac
gatcacatccacttcctccagtgtttcccgtctctctgtgtttctcctggatctgaggac
tcacccagcttcactgtcaatcaacatctctcatttgttggagtgaggaaatctctctca
aatctgaaacaacaagtcgagaaaatctgtgaagaggaattcaacaaaatccgtccacaa
gctgtagtacttcagaaaagcagagaggatttactgcggtatttctgctatctgattctg
gatcccaacacggtacatcgtcgactcattctgtctgagaagaacagagtggtgaagcgc
aacaggacagaacagccataccctgatcatccagagagatttgactcctggactcaggtg
ttgtgtaaggagagtttgtgtggacgctgttactgggaggtggagtggagcggtgatgtg
tccatatcagtctcctataaagagatcagcaggaaaggaggggcaaatgagtgtttgttt
gggtacaacaatcagtcctggagtctgcagtgttccccttcctctgtcgctttctggcac
aacaaaattaagactgagctccgaggtccagcatcctccagaataggagtgtatgtggat
cacagtgcaggtacaactctgtccttctacagcatctctgacacgatgaggctcctccac
agagtccacaccacattctctcaccctcatcctctatatgctgggttctgtgtaggtaat
aactcaattctgaggttatgtgacttgaaatga
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