Ictalurus punctatus (channel catfish): 128633054
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Entry
128633054 CDS
T04658
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
128633054
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128633054
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
RCC1
zf-UDP
PIN_8
Mt_ATP-synt_D
Fibin
DUF4407
Motif
Other DBs
NCBI-GeneID:
128633054
NCBI-ProteinID:
XP_053537623
UniProt:
A0A9F7RLP5
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Position
7:complement(30362978..30368611)
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AA seq
598 aa
AA seq
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MAEANILGLQDQFSCPICLDLLKDPVAISCGHTFCMVCINGCWDQEDQKGVYSCPQCRQT
FTPRPVVSKNTVLAEVVETLKKTGLQATRPAHCSAGPEDVECDSCTGRKSKAIKSCLVCL
ASFCETHLQPHYESPAFKKHKLVEASRRLQEQICSQHDKLLEVYCRTEQQCICMLCILDK
HKRHDTVSAAAGRVEKQKQLLEMQGKFKQRIQDRQKELQKLRNSVETHKRSAQTAVHETE
KLFTALIKSIERRCSELTALIRAQEKAAVSEAEEVMKQLEQEIAELKRRDSEMEELSHTE
DPIYFLQSFQSVSTTPKSAVVPTISPHLTFEDVVKSVSNLREKVEECSKEEFGKILAGVS
YVCMFPVPEPRSREDFLKYSCQLRLNPNTANKLLCLSEENTLVTCSSTQQSFPDHAERFD
SYPQVLCTESVCGRCYWEVEWSVGSIAESHKDISRKGKSYEWSGNDGVPIAESYKDIRIK
GYSFEWSGNDGVSIAVSYKDISRKGDQCVFGFNDQSWRLLCSPNKFIFCHNNREINVPVM
PSSSRIGVYVDHRAGILSFYGVSDTMKLLHSVRTTFTQPVYPGFMVWKGSRVKLCHLK
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcgaatattttaggacttcaggatcagttcagctgtccaatctgtctggat
ctacttaaggatccagtagctatttcatgtggacacactttctgtatggtgtgtattaat
ggctgctgggatcaggaggatcagaagggagtctatagctgtcctcagtgtagacaaacc
ttcactccaagacctgttgtgagtaaaaacactgttctggctgaagtagtggagacactg
aagaagacgggactccaagctacacgtcctgctcactgttcagctggacctgaagatgtg
gagtgtgattcctgcactgggagaaaatccaaagccatcaagtcctgtctggtgtgtctg
gcctctttctgtgaaactcacctccagcctcactatgaatctcctgcctttaagaagcac
aagctggtggaagcctccagacgactccaggagcagatctgctctcagcatgacaaactg
ctggaggtttactgtcgcactgagcagcagtgtatctgcatgttgtgtatattagataaa
cataaaagacatgatacagtatcagctgcagcaggacgagttgagaaacagaagcagttg
ttagagatgcagggaaaattcaagcagagaatccaggacagacagaaggagcttcagaag
ctgaggaattctgtggagactcacaaacgctctgcacaaacagcagtgcatgaaactgag
aagttatttactgctctgatcaaatccattgagagaagatgttctgagctgacagcactg
atcagagctcaggagaaagctgcagtgagtgaagctgaagaagtcatgaagcaactggag
caggagattgcagagctgaagaggagagactctgagatggaggagctttcacacacagag
gatcccatttatttcctccagagttttcagtctgtctcgaccactcctaaatctgcagtt
gtacccaccatcagtcctcatctcacttttgaggatgtagtaaagtctgtgtctaatctg
agagagaaagtagaagaatgcagtaaagaggagtttgggaaaatattagctggagtgagc
tatgtctgtatgtttcctgttcctgaaccccgaagcagagaagattttctcaaatattcc
tgccaattgagactgaatcctaacacagctaataagctcctctgtctgtctgaggagaac
acgttggtgacctgcagttcaacacaacagtcctttcctgatcatgctgagaggtttgac
tcttatccccaggtgttgtgtacagagagtgtatgtggacgctgttactgggaggttgag
tggagtgtgggttctatagcagagtcacataaagacatcagcaggaagggaaaaagttat
gagtggagtgggaatgatggcgttcctatagcagagtcatataaagacatcagaataaag
ggatacagttttgagtggagtgggaatgatggggtttctatagcagtgtcatataaagac
atcagcaggaagggtgatcagtgtgtgtttggattcaatgatcaatcctggagattgctt
tgctctccaaataaattcatattctgtcacaataaccgagaaattaatgtccccgtaatg
cccagctcctctagaataggagtgtatgtggatcacagggcagggattctgtccttctac
ggcgtctctgacacgatgaagctcctccacagcgttcgcaccacgttcactcagcctgtt
taccccgggtttatggtttggaaaggatcaagggttaaactatgtcatttaaaatag
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