Ictalurus punctatus (channel catfish): 128633059
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Entry
128633059 CDS
T04658
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
128633059
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128633059
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-RING_6
U-box
CobU
Glyco_hydro_88
Motif
Other DBs
NCBI-GeneID:
128633059
NCBI-ProteinID:
XP_053537632
UniProt:
A0A9F7TLE0
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All DBs
Position
7:30687144..30692965
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AA seq
549 aa
AA seq
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MAETNILGLQDQFGCPICLDLLKDPVTILCGHTFCMVCINGCWDQEDQKGVYSCPQCRQT
FTPRPVVSKNAVLAEVMEKLMIEHQARRPAHCSTVTEECDICTGKKSKAIKSCLVCLASF
CETHLQPHYESPAFKKHKLVEASRRLQEQICSQHDKLLEVYCCNDQQCICMLCMLHEHKG
HDTVSAAEASAEKKKQLLKTQRKCQQRILDREKEHQELSEAVEFYERSAQKAVQESERIF
TELIRSIERRRCEVTALIRAQEKAAVSRAEEVMKQLEQEIAEMKRRDSELEELSHTDPIH
FLQSFRSLLDIPGSADVHSIELSPFLSLEDVTAFVSQLRDKVEKFCCQEFRMVSNAVKEI
QIIPLPEPKSREEFLQYSCQFTLDPDTVNKHLCLSERNTVVTCSETPQSYSVHPDRFDYY
LQVLCTESVCGRCYWELEWSGHHGVSIAVSYKNISRKGKGTECLFGRNDQSWRLFCYPSC
YSFRHIKKEIKIPVMPSSSRIGVYVDHRAGTLSFYSVSDTMKLLHRVHTTFTQPLYPGFV
VCKGSAIKL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacgaatattttaggacttcaggatcagttcggctgtccaatctgtctggat
ctactcaaggatccagtgactattctctgtggacacactttctgtatggtgtgtattaat
ggctgctgggatcaggaggatcagaagggagtctatagctgtcctcagtgtagacaaacc
ttcactccaagacctgttgtgagtaaaaacgctgttctggctgaagtaatggagaaacta
atgatagaacaccaagctagacgtcctgctcactgttccactgtaactgaagagtgtgat
atctgcactgggaaaaaatccaaagccatcaagtcctgtctggtgtgtctggcctctttc
tgtgaaactcacctccagcctcactatgaatctcctgcctttaagaagcacaagctggtg
gaagcctccagacgactccaggagcagatctgctctcagcatgacaaactgctggaggtt
tactgttgcaatgatcagcagtgtatctgcatgttgtgtatgttacatgaacataaagga
catgatacagtatcagctgcagaagcaagcgctgagaaaaagaagcagctgttgaagaca
cagagaaaatgtcagcagagaatcttggatagagagaaggagcatcaggagctatcagaa
gctgtggagttttatgagcgctctgcacaaaaagcagttcaggaaagtgagaggatcttt
acggagctgatcagatccatcgagagaagacgttgtgaggtgacagcgctgatcagagct
caggagaaagctgcagtgagccgagctgaagaagtcatgaagcagctggagcaggagatt
gcagagatgaagaggagagactctgagctggaggagctttcacacacggatcccatccat
ttcctccagagtttccgctctcttttggacattcctggatctgcagacgtacactccatc
gagctcagtcctttcctctctcttgaggatgtaacagcgtttgtgtctcaactgagggac
aaagtggaaaagttctgctgtcaggagttcagaatggtatcaaatgcagtaaaagaaatc
cagattattcctcttcctgaacccaaaagcagagaagagttcctacagtattcctgccag
ttcacactggacccggacacggtaaataaacacctctgtctgtctgagaggaacacagtg
gtgacctgcagtgaaacaccacaatcctattctgttcatccagacagatttgactattat
ctccaggtgttgtgtacagagagtgtgtgtggacgctgttactgggagctcgaatggagc
ggacatcatggcgtttctatagcagtgtcgtataaaaacatcagcaggaaaggaaaaggt
actgaatgtttgtttggccgaaacgaccagtcctggagattgttttgctatccctcctgc
tactcgttcagacacattaaaaaagaaattaaaatcccagtaatgcccagctcctctaga
ataggagtgtatgtggatcacagggcaggaactctgtccttctacagcgtctcggacacg
atgaagctcctccacagagttcacaccacgttcactcagcctctttaccccgggtttgtg
gtttgtaaaggatcagctattaaactgtaa
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