Ictalurus punctatus (channel catfish): 128635269
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Entry
128635269 CDS
T04658
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
128635269
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128635269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_10
U-box
PRP1_N
zf-RING_6
Spc29
Zn_ribbon_SprT
LMBR1
UPF0242
TcdA_TcdB_pore
DUF6377
Motif
Other DBs
NCBI-GeneID:
128635269
NCBI-ProteinID:
XP_053543257
UniProt:
A0A9F7TRG0
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Position
17:complement(24869117..24876574)
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AA seq
555 aa
AA seq
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MAESSISVDQDQFSCPVCLDLLKNPVVTSCGHSFCKVCINGCWDQEDVKGVYSCPQCRET
FTPRPVLRRNNMLAEVVEKLKKTELHAASPAHCYAGPGDVECDSCTGRKCKAAKSCVVCL
ASFCEDHLKPHFQSPAFKKHKLVEACAELQEKICSQHDKLIEIFCRTDQSFICYLCSMDD
HRGHDTVSTKAERMKKQNELQEEQMKSQQRIQEKQEKVQELKQTVDTIKMHSQAAVDESE
KIFTEMISSMDKKCSEVKEQIRAQEKADLSRAERLLKQLEQEIADLKRRVTELEQLSHTH
DHIHFLQSFPSLCVSPGSEDSPSFTVHQHPSFDGVRKSLSDLKKRVEEICEEEFNKIRPQ
VAAVQMISLSEPESREDFLQYFCYLTLDPNTVNHDLILSEKNRAMKRKGRKQRYSDHPER
FDSWLQVLCKESVCGRCYWEVEWSSVVYISVSYKEISRKGRGDECVFGFNSQSWCLWCSS
SSVSFRHYYTQTDLRGPASSRIGVYVDHSAGTLSFYSVSDTMKLLHRVHTTFTQPLYAGF
WMWSSDSTVRFCDLK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatccagtatttcagtagatcaggatcagttcagctgtccagtgtgtctggat
ctcctgaagaatccagtagttacttcctgtggacacagtttctgtaaggtgtgtattaat
ggctgctgggatcaggaggatgtgaagggcgtctacagctgtccccagtgtagagagact
ttcactccaaggcctgttctacgcaggaacaacatgctggctgaagtggtggagaaactg
aagaagactgaactccacgctgcttctcctgctcactgttacgctggacctggagatgtg
gagtgtgattcctgcaccgggagaaaatgcaaagccgccaaatcctgtgtggtgtgtctg
gcctccttttgtgaagatcatcttaaacctcactttcagtctcctgcctttaagaagcac
aagttagtggaagcctgtgcagagctccaagagaagatctgctctcagcacgacaaactg
atcgagatcttctgtcgtactgaccaaagcttcatctgttacttgtgttcgatggatgat
cacagaggccatgatacggtttcaactaaagcagaaagaatgaaaaaacagaatgagcta
caggaggagcagatgaaatcccagcagaggatccaggagaagcaggagaaggtgcaggag
ctgaaacagactgtggacactattaagatgcattcacaggcagcagtagatgagagtgag
aagatctttactgagatgatcagctccatggacaaaaagtgctcggaggtgaaggagcag
atcagagctcaggagaaagctgatctgagtcgagctgaacgactcctgaagcaactggag
caggagattgctgatcttaagaggagagtcactgagctggagcagctttcacacacacac
gatcacatccacttcctccagagtttcccgtctctctgtgtttctcctggatctgaggac
tcacccagcttcactgtccatcaacatccctcatttgatggagtgaggaaatctctctca
gatctgaaaaaacgagtggaggaaatctgtgaggaggaattcaacaaaatccgtccacaa
gttgcagcagttcagatgatttcactctcagaaccagagagcagagaagattttctgcag
tatttctgttatctgactctggatcccaacacagtaaatcatgacctcattctgtctgag
aagaacagagcaatgaagcgcaaggggagaaaacagcgatactctgatcatccagagaga
tttgactcctggcttcaggtgttgtgtaaggagagtgtgtgtggacgctgttactgggag
gtggagtggagcagtgttgtgtacatatcagtctcatataaagagatcagcaggaaagga
cggggtgatgagtgtgtatttggattcaacagtcagtcctggtgtctgtggtgttcttct
tcctctgtctctttccggcactactacacacagactgatctccgaggtccagcgtcctcc
agaataggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctctgac
acgatgaagctgctccacagagtccacaccacattcactcagcctctatacgctgggttc
tggatgtggagttctgactcgactgtgaggttctgtgatctgaaatga
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