Imperialibacter roseus: RT717_21995
Help
Entry
RT717_21995 CDS
T09469
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
iro
Imperialibacter roseus
Pathway
iro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RT717_21995 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iro03400
]
RT717_21995 (uvrB)
DNA repair and recombination proteins [BR:
iro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RT717_21995 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RT717_21995 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
PolyA_pol_RNAbd
AAA
AAA_16
UvrD-helicase
UPF0113
AAA_33
DUF87
Motif
Other DBs
NCBI-ProteinID:
WOK05752
LinkDB
All DBs
Position
complement(5209867..5211885)
Genome browser
AA seq
672 aa
AA seq
DB search
MDFELTSEYQPTGDQPKAIAELVKGLNANEPAQTLLGVTGSGKTFTVANVIKEVNRPALV
LSHNKTLAAQLFGELKQFFPNNAVEYFISYYDYYQPEAFIPTTGLYIEKDLSINEEIEKL
RLSATSALLSGRRDVIVVASVSCIYGIGNPDEFGKNVIRLEEGQQITRNQLLFSFVDILY
SRTEVEFKRGNFRVKGDTVDIFVAYADFAYRIIFWGDEIESIQRIDPQSGKKLSDEKIIT
IFPANLFVTGKDVIQQAIIEIQDDMMAQVNYFESERRFLEAKRLKERTEFDLEMIRELGY
CSGVENYSRYFDRRQSGQRPFCLLDYFPEDFVMVIDESHVTVPQIRAMWGGDRSRKVNLV
DYGFRLPSALDNRPLTFNEFEGMLSQVIFVSATPAEYELRKSEGVVVEQIIRPTGLLDPE
IDVRPSINQIDDLLEEIDERVKKEERVLVTTLTKRMAEELQKYLERAGVKSRYIHSEVNA
LDRVEILRELRLGVFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRNQRSLVQTIGRA
ARNESGKVIMYADKITDSMREAIDETYRRRDIQIAYNKEHGITPRSVKKNIGSIMGQTKV
ADSKKDGRKYYVENEEPSIAADPIVQYMPKPELEKLIKQTQKAMEKAAKELDFIDAARLR
DELADLKKLFEK
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
ttggacttcgaactaacatctgaataccaacccacaggggatcagccaaaggcaattgca
gagcttgtaaaaggtctcaatgccaacgaacccgcccaaacgctgctgggagtgacaggc
tccggcaaaaccttcacagtggccaacgtcatcaaggaagtgaataggccagcccttgtc
ctcagtcataataagacgctggcagcacagctttttggagaattgaagcagttctttcct
aacaatgctgttgagtacttcatttcctactacgactactaccagccggaagcgtttatt
ccaaccacaggactttacatagagaaggatctttctatcaacgaagaaattgaaaagctg
aggctaagtgccacttcggcgctgcttagcggaaggcgggacgtgatagtggttgcttca
gtctcctgcatatacggtataggcaatccggatgagtttggcaaaaatgttattcggtta
gaggaagggcagcagatcacccgaaatcaactgcttttcagctttgtggatattttgtac
agcagaacggaggtagagtttaagcggggtaactttagggtgaagggggacacggttgat
atttttgttgcgtatgccgactttgcctaccgcattattttctggggagacgaaattgaa
tccattcagcggatcgatccacagtcaggtaaaaagctcagcgacgagaaaataataaca
atatttcctgccaatctttttgtcaccgggaaagatgtgatccagcaggccatcatcgaa
attcaggacgatatgatggctcaggtcaactattttgaaagtgagcggcggtttctcgaa
gcaaaacggttgaaagagcgaacagagtttgatcttgaaatgataagagagctcggctat
tgctcgggcgtggagaactatagccgctatttcgacaggaggcagtcgggccaaaggcct
ttctgtctgcttgactatttccctgaagattttgtgatggtaattgacgaaagccatgtg
actgtgccgcagatcagggctatgtggggaggcgacaggtcgagaaaggtgaacctggtg
gactacggtttccggcttccatcggcactggacaacaggccgttgacattcaatgaattt
gaaggaatgctgagccaggtaatatttgttagtgccacgccggcagagtatgagctcaga
aagtcagagggtgtggtcgtggaacagatcatcaggccaaccggtcttttggatccggag
attgacgtcaggccgagtatcaatcagatagacgatctgttggaagagattgatgagcgg
gtgaaaaaggaagaaagggtgctggtgactacgcttactaaaagaatggcggaggagctt
cagaagtaccttgagagagctggcgtgaagtcacgctatatccactcagaggtgaatgca
cttgacagggtagaaattctcagagagctaaggctaggtgttttcgatgtccttgtaggt
gtcaaccttttgcgtgagggcctcgatttaccggaagtttcgctggtcgctattttggat
gccgacaaagagggctttcttagaaaccagcgatcgttggttcagacaattggtcgggcg
gccagaaatgaaagcggaaaggtgattatgtacgccgataaaatcactgactccatgcgg
gaggccattgatgagacctatcggaggagggacatccaaattgcttacaacaaagagcac
ggcattaccccccgatctgttaaaaagaatatcggctcaattatgggtcaaactaaagtg
gctgactccaaaaaggacggaaggaagtactacgttgaaaatgaggagccaagtattgcc
gccgacccgattgttcaatacatgccaaagcctgagctcgaaaagctgatcaagcaaaca
caaaaagccatggaaaaagcggccaaggagctggattttattgacgcagcgaggttgagg
gatgagctagctgatttaaaaaagttgtttgaaaaatga
DBGET
integrated database retrieval system
