Imperialibacter roseus: RT717_22310
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Entry
RT717_22310 CDS
T09469
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
iro
Imperialibacter roseus
Pathway
iro01501
beta-Lactam resistance
iro01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RT717_22310
01503 Cationic antimicrobial peptide (CAMP) resistance
RT717_22310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iro02000
]
RT717_22310
01504 Antimicrobial resistance genes [BR:
iro01504
]
RT717_22310
Transporters [BR:
iro02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RT717_22310
Antimicrobial resistance genes [BR:
iro01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RT717_22310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
WOK05811
LinkDB
All DBs
Position
complement(5287681..5290740)
Genome browser
AA seq
1019 aa
AA seq
DB search
MAGLSNISINRPVLAVVMSIIIIIFGIIGFNFLGIREYPSVDPPIISVSTSYTGANASII
ESQITEPLEESINGIAGIKSLTSTSRDGASSIRVEFDLEIDLEAAANDVRDRVSRATRNL
PPDCDPPSVRKADADAMPLVFLNVKSDKRTLLGLSDVAENIFKERLQTIKGVAAVQIWGE
RRYSMRLWMDPAKLAAYSLTPLEVLNAVTRDNVELPSGLVEGTNMELTVRTMGRISTPEE
FNQLIVKEDDNNVVRFQDVGRAELGPENNRTILKRDGVPMVGVVLQAQPGTNIIEIVDEF
YRRLEFIKKDLPADIELGIGFDVTEYVRKSITEVQETIFMAFVLVVLIIFAFLRDWRTTL
IPVATIPISLIGTFFIMYLAGFTINVLTLLGIVLSIGLVVDDTIVVLENIYTKIEDGMSP
LEAGLKGSTEIFFAVISTTVALVAVFMPVVFLDGLTGRLFREFGIVVAGAVIISSFVALT
LTPMLSTKILKKREKKQWLYSVTEPFFDWMNEGYNKSLENFMARKWLALVVLVLSFGGIY
LLGNNIQSELSPMEDRGEFRINSTGPEGATFEYMDAYLDKMLALISEAVPEKEALISMTS
PSFGSSGSVNSGNVRVMMVDPSERTRSQQEVVDAISPLVMRMTEARSFVSQSQSIGNRRG
GLPVQYVIQATTIEKLKEVLPAFVDAASADEHFNFVDLDLKFTKPEINIEIDRDKARSLN
VSIRDVAQTLQLGLSGSRFGYFIKDGKQYQIIGQVDREDRNDPLDLKALYVKNQVGDLIQ
MDNLVKITEQSTPPQLYRYNRFVSATVSASLVPGYTIKDGIDAMDAIAAKVLDGTFQTEL
SGPSAEFRDSSSSLYFAFIFALILIYLVLAAQFESFRDPFIIMLTVPMAIAGAFLSLWYF
DQTLNIFSQIGIIMLIGLVTKNGILIVEFANQRKAHDMAVEEAIVGAAQQRFRPILMTSL
STILGILPIALALGAGSESRVSMGIAIIGGLLFATILTLYVIPAMYVYISGKEKRMARF
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtctatccaacatcagtattaacagacccgtgctggcggtggtaatgtccatc
attatcatcatttttggcatcataggattcaactttctggggatcagagagtatcctagt
gttgacccacctattatctcggtaagcacctcttacaccggcgccaatgcgagcatcata
gagtcgcagattaccgagccattggaagaatcgatcaatggaattgccggcatcaaaagt
cttacgtctaccagtagagatggagccagctctatcagggttgagtttgacctggaaatt
gacctggaagcagccgccaacgatgttagagatcgggtgtcgagagccaccagaaacctc
ccgcccgactgtgatccgccgtcggtgagaaaagcggacgctgatgccatgccattggtt
tttttgaatgtaaaaagtgacaaaagaacactccttggcctttccgatgtagcagagaat
atttttaaggagcgacttcagactataaaaggagtggcagccgtccagatttggggcgag
cgtcgctattccatgagactttggatggatcccgccaagctggcggcctattcgctcacg
ccattggaggtcttgaatgcggtcacacgggacaacgtcgaacttccttcggggctggta
gaaggcacaaacatggaactcaccgtgagaaccatgggcaggatttccacaccggaagaa
ttcaaccagcttatcgtcaaagaggatgacaacaatgttgtgcgttttcaggatgttggg
agagctgaactgggaccagaaaacaaccgaaccatactcaaaagagacggagtacccatg
gttggcgttgtgcttcaggcgcagcccggaactaatatcatagagattgtagacgagttt
tacagaaggctggagtttatcaagaaggatctccccgccgatattgaactcgggataggc
ttcgacgtcacagagtatgtgaggaaatcgatcacagaggtgcaggagactattttcatg
gcttttgtgctggtggtgttgattattttcgccttcctgcgtgattggcgaactacgcta
attcctgttgccaccatcccaatatcgctgataggcactttcttcatcatgtaccttgcg
ggcttcaccatcaacgtactgacacttctgggcatcgtgctgtcgatagggctcgtggtg
gatgacacgattgtggtgctggaaaatatttacactaagatagaagatgggatgtcgccg
ctggaggccgggcttaagggctcgacggagatattcttcgccgttatttccaccaccgtg
gcgttggtggcagtgttcatgcctgttgtatttctcgatggcctcacaggccgactcttc
agggagtttgggatcgtcgtggccggagcggtaataatatcgtcgtttgttgcccttaca
cttacgccaatgctctctaccaaaattcttaagaaaagagagaagaagcagtggttgtac
agtgtaaccgaaccttttttcgattggatgaacgagggctacaacaaatcgctcgaaaac
tttatggcccgcaaatggcttgctttggtcgttcttgttctttcttttggaggcatttat
ctgctaggtaataatatccaaagcgagctatctcccatggaagacagaggtgagttcagg
atcaacagcaccgggcccgagggtgccaccttcgagtacatggacgcctaccttgataag
atgcttgcgttgatcagtgaggcagtgccggaaaaagaggcactcattagcatgaccagc
cccagctttggatcatcgggctccgtgaattctggaaatgtgagggtgatgatggttgat
ccgtcggagcgaaccagatcgcagcaagaggtagtagatgccattagccctctggtgatg
agaatgacggaggcccgttcttttgtttctcaaagccagtcgatagggaatagaagaggg
ggactacctgtgcaatacgtaatacaggcaactaccattgaaaaattgaaagaagtgctg
ccagcctttgtggatgcggcaagtgccgacgagcattttaatttcgttgaccttgacttg
aagtttaccaagccagagatcaacatagaaatagatcgtgacaaggcccgtagtttgaat
gtatcgattcgggacgtcgcccagacactgcagcttggcttgagcggctccagatttggt
tatttcatcaaagacggaaagcagtaccaaataataggccaggtggacagagaagatcgc
aacgacccactcgacctgaaggcactttatgtgaagaaccaggtaggagatcttattcag
atggacaacttggtaaagattacggagcaaagcacgccaccgcaactctatcggtacaac
agatttgtgtcagcaacggtatcagcgtcgttggtgcctggttataccatcaaggatggt
attgatgccatggatgccatagcagcgaaagtgctggatggcacctttcaaaccgagtta
tcgggcccttctgcagagttcagagactcttcttcaagcttgtacttcgcttttatattc
gctcttattttgatttacctggtgctggcggctcagtttgaaagcttcagagacccattt
atcattatgcttactgtgcccatggcaattgcgggggcatttctatcgctatggtatttt
gaccagacactcaacatattcagccagataggtattatcatgctgataggtttggtaaca
aagaatggtatcctgattgtggaatttgccaaccaacgcaaagctcatgacatggccgta
gaggaagccatagttggggcggcacagcaacgattccgccctattctgatgaccagcctg
tcgaccattctgggtattctgccgattgctttggcacttggtgcaggctctgaaagccgt
gtgtcgatgggtatcgccatcattggagggctgttatttgccacaatactcaccctgtat
gtaatacctgccatgtatgtctatatctctggcaaggaaaaaagaatggctagattttaa
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