Imperialibacter roseus: RT717_25405
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Entry
RT717_25405 CDS
T09469
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
iro
Imperialibacter roseus
Pathway
iro00521
Streptomycin biosynthesis
iro00523
Polyketide sugar unit biosynthesis
iro00541
O-Antigen nucleotide sugar biosynthesis
iro01100
Metabolic pathways
iro01110
Biosynthesis of secondary metabolites
iro01250
Biosynthesis of nucleotide sugars
Module
iro_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
iro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
RT717_25405 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RT717_25405 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RT717_25405 (rfbC)
Enzymes [BR:
iro01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RT717_25405 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WOK06416
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All DBs
Position
6060925..6061482
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AA seq
185 aa
AA seq
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MIIEETRFPGLFVIQPKVFEDERGYFFESFSAANFEKATGVKADFVQHNQSKSSKGVLRG
LHFQREPYAQAKLVRVLSGTILDVVVDLREGSPTYQQHFSIEMSAEDKKQLFVPRGFAHG
FVILSETAEFFYCVDRPYAPNFDDGIRFDDSSLNIDWKLDKLSLILSEKDKGLGTLNDAA
GKFKF
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgaagaaaccaggtttccaggcttgtttgttattcagcccaaagtatttgag
gatgaaagaggctactttttcgagagcttcagtgcagccaatttcgaaaaagcgacgggc
gtcaaagccgattttgtacaacacaatcagtcgaaatcgtcgaaaggagttctgcgagga
ctccacttccaaagagaaccttatgcacaggctaaattggttagggtactctcgggaact
atactagatgtagtagtcgatttgagagaaggctctccgacttaccagcaacactttagc
atcgagatgagcgccgaggacaaaaagcaactgttcgtgcccagaggttttgcccacggc
ttcgtcatcctttccgaaactgctgagtttttctactgcgtcgaccggccatatgcacca
aacttcgacgatggcatacgattcgacgatagttcactaaacatcgattggaagcttgat
aaattgtctctgattctttcggagaaagacaaagggctcggcacacttaatgatgccgca
ggtaagttcaaattttaa
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