Ixodes scapularis (black-legged tick): 8035432
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Entry
8035432 CDS
T01131
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03022
Basal transcription factors
isc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
8035432
09124 Replication and repair
03420 Nucleotide excision repair
8035432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
isc03021
]
8035432
03400 DNA repair and recombination proteins [BR:
isc03400
]
8035432
Transcription machinery [BR:
isc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
8035432
DNA repair and recombination proteins [BR:
isc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
8035432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
8035432
NCBI-ProteinID:
XP_029838281
EnsemblRapid:
LOC8035432
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MSLSAPSSSLKCNDLHAYLKTLSPATLDQLYTHPATCLAVFRELPIISRHYIMRLMFVDQ
PVPQAVVSSWNEQKYVKEHLESLEALTALHIWADSSLPGGLPGWSLSGVFRKNIQIALLG
GGQPWAVYSTLEKDKHGRDAQFLDRYAMERWECVLHFMVGCHTKEGISADAVRILLHAGL
MKSEEEEGSAPLITMEGFQFLLMDTASQVWHFVLQYLDTLESRGLNLVECLTFLFQLSFL
TLGKDYSTEGMSESLLVFLQHLREFGLVYQRKRRSGRFYPTRLAINLASGLKETNLRSYE
AGYIVVETNYRVYAYTDSQLQVALLALFCELMYRFPNLVVGVLTRESVRQALRSGITSNQ
IIRFLQMHAHPEAQKQSPVVPPTIMDQLRLWELERDRFNFREGVLYSQFISQSDFQLLRN
YASDLGVLIWDNPSKRVMVVNRNGHDEVKRFWKRHRQDH
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgtcggcgccgagcagttcgctgaaatgtaacgatctgcacgcttacctgaag
accctgtcgccggcgacgctggaccaactctacacgcacccagcaacatgcctcgccgtc
ttccgggagttgccgatcatttcccgccactacatcatgcggctcatgttcgtcgaccag
ccagtgccgcaggctgtcgtgtcatcgtggaacgagcagaaatacgtcaaggagcacttg
gagtccctggaagcgctgacggcactgcacatctgggcggactcgagccttccaggaggc
cttcctggatggtcgctgagtggtgtcttccggaagaacatccagatcgccttgcttgga
ggtggccagccgtgggcagtgtacagtaccctggagaaggacaagcacggccgggacgcg
cagttcctcgaccggtatgccatggagcggtgggagtgtgtgctgcacttcatggtgggc
tgccacaccaaggaaggcatcagtgcggacgcagtgcggattctccttcatgcggggctc
atgaagtcggaggaagaagagggcagtgcccccctgatcaccatggaagggttccagttt
ctcttgatggacactgcttcccaggtgtggcactttgtgcttcaatacctggacactctg
gagtcacggggactgaaccttgtcgagtgcttgacgttcttgttccaactgagcttcctg
acgcttgggaaggactacagcacggagggcatgtcggagtcactgctggtcttcctgcag
cacctgcgggagtttggactcgtctaccagcggaagaggcgttccgggcggttctacccc
acgaggctggccatcaacctggcctcgggtctgaaggagaccaacctccgcagttacgag
gcgggctacattgtggtcgagaccaactacagggtctacgcctacacagattcccaactt
caggttgcattgttggcactgttctgtgagctaatgtacaggtttcccaacttggtggtc
ggcgtgctgacgagagagagtgtgcggcaagcgctgcgaagtggcatcacatcgaatcag
atcatcaggtttcttcaaatgcacgctcatcctgaagctcagaaacagagccccgtggtg
cccccgaccatcatggaccagctgcggctgtgggagctggagagggaccgcttcaacttc
cgggaaggggtgctctacagccagttcatctcacagagcgacttccagctgctgcggaac
tacgcctcggacctgggtgtgctcatctgggataacccaagcaagagggtgatggtggtg
aacaggaatgggcacgacgaagtgaagcgcttctggaaacgtcaccgtcaggaccactga
DBGET
integrated database retrieval system
