Ipomoea triloba (trilobed morning glory): 115997186
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Entry
115997186 CDS
T07384
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115997186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
115997186
Spliceosome [BR:
itr03041
]
Common components
Common spliceosomal components
SR proteins
115997186
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_3
zf-CCHC_4
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
115997186
NCBI-ProteinID:
XP_031092553
LinkDB
All DBs
Position
11:complement(1326952..1330363)
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AA seq
374 aa
AA seq
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MPRYDDRYGSATRLYVGHLSSRTRSRDLERLFCKYGRVRDVDMKRDYAFIDFSDPRDADD
ARRYYDGREVDGRRIIVEFAKGVPRGPGGSRDYLGRGPPPGSGRCFNCGIEGHWARDCKA
GDWKNKCYRCGERGHIEKKCPNSPQKLKRGRSYSRTPERSRSPHRGRRHSRSYSPSRSYS
RSRSPARREQVEPERRSRSPAISRSPEPRSATPSKTQKRSPNPIEASPPSQREESPSKRG
KVMADQDGYDRSPPKRAKAMTEQDGYERSPPSKRAKVITEQDGYDRSPPSKRAKAVTEGD
GYDRSPPSKREKAMTEDGNDRSPKGKRSHSPSSPERGSVAPRKYDESPFEANGRSGSSPS
PRYERSPADDRDDN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgttatgatgatcggtatggtagtgcgacccgtctctatgtgggtcatttgtct
tctcgtacccgttctcgtgatttggagcgattgttctgcaaatacgggagagtacgagat
gtggacatgaagcgtgactatgccttcattgattttagtgaccctcgggatgctgatgat
gcaagacgttattatgatgggcgtgaagttgatggacgccgcataattgtggaatttgcc
aagggagtgccacggggtccaggtggttcccgagattatcttggtcgtgggccccctcct
ggttcaggtcgctgcttcaactgtggaattgaaggtcattgggcccgtgattgcaaagct
ggtgattggaaaaacaagtgctataggtgtggagaaagaggtcatatagaaaagaaatgt
ccaaatagtccacagaagctcaaacgtggaaggagttactcaaggacacctgagagatca
cgttctcctcaccgtggccggaggcacagtcgaagttacagcccaagccgcagctatagc
cggtcaagatctcctgcaaggagagaacaagttgagcccgagagaagatccaggagccct
gcaatcagcagaagccccgagccaagaagtgctactccctctaaaacacagaagcgcagc
ccaaaccccattgaggccagccccccaagccagagggaagagagtccttctaagagggga
aaggtgatggcagaccaagatggctatgatagaagccctcctaagagggcaaaggctatg
acagagcaagatggctatgagagaagccctccttctaagagggcaaaggtgataacagaa
caagatggctatgacagaagccctccttctaagagggcaaaggcagtgacagaaggagat
ggctatgacagaagccctccttctaagagggaaaaggctatgacagaagatggcaatgac
agaagccctaaggggaaaagaagccatagtccttcgagccctgaaagagggagcgtagct
cctaggaagtatgatgagagccctttcgaagctaatgggcgcagtggcagcagcccaagt
ccaaggtatgaaaggagccctgctgatgaccgggacgataattag
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