Ipomoea triloba (trilobed morning glory): 116001886
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Entry
116001886 CDS
T07384
Name
(RefSeq) uncharacterized protein LOC116001886
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116001886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
itr03400
]
116001886
Enzymes [BR:
itr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
116001886
DNA repair and recombination proteins [BR:
itr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
116001886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
DUF5841
Motif
Other DBs
NCBI-GeneID:
116001886
NCBI-ProteinID:
XP_031097694
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All DBs
Position
13:703476..707298
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AA seq
363 aa
AA seq
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MSGATRVRPKNVSDSEEMAIYGPAGTKPQKSVGVQRPLSKPLKKGEKAAYEGDMVEKDKS
GVQSMLRRHEFLMHSNLSLSASCSSDASTDSFRSRASTGQIYRTSSASPRWKQSSSRSKV
VVSDSSHSPDSVHSKKRCAWVTPNTDPSYANFHDEEWGVPVHDDKKLFELLVLCGALAEL
TWPSILSKRHIFREVFADFDPVAVAKFNERKIIAPGSTASSLLSELKLRTIIENARQVSK
IIQEFGSFDNYIWSFVNHKPTVSRFSYARQVPVKTPKADVISKDLVRRGFRGVGPTVIYS
FMQSAGITNDHLISCFRFQECIAAALGKQKDDSEGPDEAGERGNEAKESEMCRSIDELSF
SSE
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggggctacaagggtaaggcctaagaatgtgtctgattcagaagaaatggcaatt
tatggacctgctggaaccaagccacagaagtctgttggtgttcaaagacctctttctaag
cctttgaaaaagggagagaaggcagcctatgagggtgatatggtggagaaggataagagt
ggtgttcaatccatgcttcgtagacacgagttcttgatgcattctaatttgtcactcagt
gcatcatgttcatccgatgcttcaactgattcattccgtagcagggcttccacgggtcag
atatacagaacgagcagtgcttctccccggtggaagcagtcgagctcgaggtctaaagtt
gttgtttcggattcatcacattcacctgatagtgtacactccaagaaaaggtgtgcctgg
gtgacaccaaatactgacccgtcttatgctaatttccatgacgaagaatggggagttccg
gtacatgatgataagaaattatttgagctcctcgttctatgtggggctctggcggaactt
acatggccttctattctcagtaaaagacacatattcagggaagtatttgcagatttcgac
cctgtagctgttgcaaagtttaacgagaggaaaataatagcacccgggagtactgcaagc
tcactattgtcagagctaaaactccgaaccatcattgagaatgctcgtcaagtgtccaag
attatacaagaatttgggtcgtttgacaattatatctggagttttgtgaaccacaaaccc
acggttagcagattcagttatgctcgtcaggttccagtgaaaacgcccaaagctgatgtg
attagcaaggacctagtgaggagagggtttaggggcgtcgggccaacagtcatttactcg
ttcatgcagtctgccgggataacaaatgaccatctcatcagctgctttaggttccaagaa
tgcattgcagcagctctcgggaaacagaaggacgatagcgaggggcccgatgaagctggg
gagagaggcaacgaggcaaaagagtcagagatgtgcagatcaatcgacgagttaagtttc
tcttctgaatga
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