Ipomoea triloba (trilobed morning glory): 116011237
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Entry
116011237 CDS
T07384
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116011237
Membrane trafficking [BR:
itr04131
]
Protein recycling
Others
EARP complex
116011237
Endosome - Golgi transport
Tethering complex
GARP complex
116011237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG4_N
MUN
Vps54_N
RINT1_TIP1
MPH2
Motif
Other DBs
NCBI-GeneID:
116011237
NCBI-ProteinID:
XP_031106636
LinkDB
All DBs
Position
2:2502246..2513063
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AA seq
827 aa
AA seq
DB search
MAATDKQNTLDYINQMFPTEASLSGVEPLMQKVHSEIRRVDAEILAAVRQQSNSGSKARE
DLAAATQAVQELMYKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTML
VSAVEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDIPKITELREKFKSIKQVLKSHV
FSDFSSLGTGKETEESNLLQQLSDACLVVDALEPSVREELVKNFCSRELTSYQQIFEGAE
LAKLDKTERRYAWIKRRLRTNEEIWKIFPPLWHVDYLLCIQFCKLTRAQLVEILGNLKEK
PDVATLLMALQRTLEFEEELAEKFGSTSRSKEAGSAEDIDRVGQNSQTVSDIRKKYEKKL
AAHHGSEYEEQDGHKDLSVPGAGFNFRGIISSCFEPHLIVYVELEEKTLMESLEKQMQEE
TWEIEEGSQTNILSSGIQVFAIIKRSLKRCSALTKSETLFNLFKVFQKILKAYATKLFAR
LPKGGTGIVAAATGIDGQIKTSDKDERVICYIVNTAEYCHKTSGELAENVSKIIDPQFVD
KVDMSEVQDEFSAVITKSLMTLVHGIETKFDTEMAAMTRVPWGTLESVGDQSEYVNGINT
ILTSSIPVLGNLLSTIYFQFFLDKLASSLGPRFYLNIFKCKQISETGAQQMLLDTQAVKT
ILLEIPSLAKQTSGAAGYSKFVSREMSKAEALLKVILSPFDSVADTYCALLPEGTPTEFQ
RILELKGLKKTDQQSILDDFNKRGSGIAQPTIVAPSAVPPAAAPNTSIAPTIANPASPVA
ISSREDVLTRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNS
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggcagctacggacaagcagaataccttggattacatcaaccagatgttcccaacagag
gcatctttatccggtgttgagccactgatgcagaaagtacatagtgaaattcgtagggtg
gatgctgagatattggctgctgttcgtcaacagagtaattctggatccaaagccagagag
gatcttgctgctgctacacaagctgtgcaggaactaatgtataagattcgagaaattaaa
accaaagcagagcaaagtgaaacaatggtccaggaaatatgtcgtgacattaagaaattg
gattttgccaagaagcatataacaacaacaattactgcacttcatcgtctcacaatgcta
gtctctgctgttgaacagcttcaagtaatggcttcaaaacgccaatataaagaggcagct
gcacagttagaggctgtgaatcagttgtgtagtcattttgaagcctatagggacatccca
aagatcacagagctaagggagaagttcaaaagcatcaaacaagtcctcaagtctcatgtg
ttctctgacttctccagcttgggaacaggaaaggagactgaagagagtaatttgctgcag
cagttatcagatgcatgcttagtagttgacgctcttgagccatctgtgagagaagaactg
gtgaagaatttttgcagcagggagcttacctcgtatcaacaaatttttgaaggagctgaa
ctagcaaagttagacaaaactgaaaggcgatatgcttggatcaagcgtcgtttgagaaca
aatgaggagatctggaaaattttcccccctttgtggcatgttgattatttgctttgcatc
cagttttgcaagttgacaagggcacaacttgtggagatccttggtaacctaaaagaaaaa
ccagatgttgcaacattattgatggctttacagcgaactttggaatttgaggaagagtta
gcagagaaatttggtagtaccagccgcagtaaagaagctggtagtgctgaagatatagat
agagttggacagaatagtcagacagtttccgatattcgaaaaaagtatgagaaaaagctt
gctgcacatcacggaagtgaatatgaggagcaagatggacacaaggatttatcagtgcca
ggagctgggttcaatttccggggaatcatttcatcttgctttgaacctcacttgatagta
tatgtagagttggaagagaagacactaatggagagtctagagaaacaaatgcaggaggag
acatgggaaattgaggagggaagtcagactaatatattatctagtggcattcaggtcttt
gcaattatcaagaggagcttgaagcgatgtagtgctttgacaaaaagtgaaacactgttt
aatttgttcaaggtatttcaaaaaattcttaaagcatatgcaacaaagctttttgctaga
ttgcccaagggcggtacaggaattgtagctgcagccacaggaatagatggacaaataaag
acatctgacaaggatgagagggtgatttgttatattgtaaacacagcggaatattgccat
aaaacatctggtgaattggcagagaatgtgtccaaaattattgatcctcaatttgtagat
aaggtggatatgtctgaagtgcaggatgaattttctgcagtcatcacaaaatcattgatg
acattagtacatggtatagaaacaaaatttgatacagaaatggctgctatgacacgtgtt
ccatggggtacacttgaaagtgttggcgatcaatcagagtatgtcaatggcataaatact
atcctcacaagtagcatccctgtccttggaaaccttctttctaccatttacttccagttc
tttttagataagcttgcatcatctcttggtccacgcttctacctcaatatattcaaatgc
aagcaaatatcagaaactggagctcaacaaatgttgttggatacacaagctgtgaagact
attcttttggaaattccttctcttgcgaaacaaacatcaggagctgctggctattcaaaa
tttgtaagtcgtgagatgagcaaagccgaagcattgttgaaggttatattgtccccattt
gactctgtagcagatacctattgtgcacttctgcctgaaggaacacctacagaatttcag
cgaattttggagcttaagggcctgaaaaaaacagaccagcaaagcatactagatgatttc
aacaaaaggggatcggggattgcccagccgactattgttgccccttcagctgtaccacca
gccgctgcacccaacacatctatagcacctacaatcgccaatccagcttcacctgtggct
atctcatcaagagaggatgtgctaaccagagcggctgcgcttggccgaggcgcagccaca
actgggtttaaaagattccttgccttgactgaagctgcgaaagatcgtaaagatggacca
ttcagaaagctctttaacagttaa
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