Ipomoea triloba (trilobed morning glory): 116021894
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Entry
116021894 CDS
T07384
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116021894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
116021894
Spliceosome [BR:
itr03041
]
Complex A
U1 snRNP components
U1 related factors
116021894
Complex B
116021894
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
116021894
NCBI-ProteinID:
XP_031118273
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Position
1:36155001..36165190
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AA seq
995 aa
AA seq
DB search
MAANPPPSGAQPLRPHPGGPMAPHGYGSFPMQFQPGAPAQQGQPFAPPVQMPNIGMGPGQ
SQAMQFSQPMQQFPPRPGQPGHIPSSQPIQMASMQPNMPIPSASMQPQQMIPSGNNHMPG
FAASSFGQTNSGINMSSQIGTPAFTAGGQPWVPPANQSAPMQHTSQQPSAFAPAVVAANT
QNNAEQSTSDWQEYEVSGRRYYYNKITKQSSWEKPLELMTPLERAEALTGWKEFTTENGR
KYYYHKEKKESKWEIPEELKLAREQAEKAAAPGPQGDAGLTSKVAIGAAGTSTEQQFTAV
TPVSSSPSTISGVPSSSAPVTPAVSVVNAPSTVVSGSSANSATLHPVITSSISVSSPAAT
LGSNADPASLASSNQAPTNGVENSSPQVVASSGVSSIQDIEQMKKSTATNIHVTVSDEKA
ADEEPLVYATKQEAKNAFKALLESANVGSDWTWDQTVRAIANDKRYGALKIHGERKQAFN
EYLMQRKKLEAEERRLRQRKAKEEFTKMLEESKELTSSTRWSKAVTMFEDDERFKAVERE
ADREDLFRNYLVDLQKKEKAKAQEDYRKNRLEYRQFLETCGFIKVDTQWRKVQDLLEDDE
RCSRLEKIDRLEVFQEYIRDLEKEEEEQRKTQKEQLRRAERKNRDAFRNMMADHIAAGTV
TAKTLWRDYCPMVKESVAYQAVASNTSGSTPKDLFEDVVEELENQYHEDKTRVKNVLKSE
KITFSPLWSFEDFKAAILETIGTPSISEVNLQLIFEDLMERAKDKEEKEAKKRQRLAKDF
VEMLSIVDEITAASSWEECKELVEDSSEYKAIGDETTLREIFEEYVTRLQEKAKEKERRR
EEEKVKKDKEKEEKEKRKDKERKEKDKEKEEQREREKEKGKERSRKDDADSESVDFVEYE
HKEDKKRDKDKDRKHRKRHHSSTDDVTSDKDEKEETKKSRRHSGERKKSKKHAHSPESDG
ESRRKRHKKERDASRRSGGYEELEDGELGEDGEIQ
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaatccaccgccatctggtgcacagcctcttcggccacatccaggtggaccc
atggcaccccatggttatggttcgtttcccatgcaatttcaacctggagcacctgcacaa
caaggacagccatttgctccacctgtacaaatgccaaacattggtatgggtcctggacaa
agtcaagcaatgcaattttctcaaccaatgcagcagtttcctccacgccctggtcagcct
ggtcacataccttcatcccagccaattcagatggcaagtatgcaaccaaatatgcctatt
ccatctgcgtcaatgcagcctcaacaaatgattccttctgggaataatcacatgcctggt
tttgcagcatcttcttttggccagacaaacagtggcatcaacatgtcatcccagataggt
acaccagcattcacagctggaggacaaccctgggtgccacctgcaaatcaaagtgcacct
atgcagcataccagtcagcaaccctcagcctttgctcctgcagttgtggctgctaatact
cagaataatgctgagcagtcgacatctgattggcaagagtatgaggtctcaggaagaagg
tattactacaacaagattacaaaacagtctagctgggagaagcctttggaattaatgaca
cctctagagagagcagaggcattaactggttggaaagaattcacaactgaaaatggcaga
aaatattactatcacaaagaaaagaaggagtcaaaatgggaaatacctgaggaattaaag
ttggcccgcgaacaagctgaaaaagcagctgctccaggaccacagggtgatgcaggcttg
acatctaaggttgcaattggtgcagctggcacctcaactgaacaacaatttactgctgtc
accccggttagctctagtccttcaacaatttctggagtaccttcaagctctgcaccagtt
acacctgctgtttctgttgttaatgctccatctacggtggtttctggatcatcagcaaat
tctgctactttgcaccctgttataacaagctcaattagtgtttcttcacctgctgctaca
ctggggagtaatgcagatcctgcttctttggctagctccaaccaggcacctacgaatggc
gtggagaattcatctcctcaagttgttgcttcctcaggtgtatcttccatacaggatatt
gagcagatgaagaaaagtactgctacaaacattcatgttacggtttcagatgagaaagca
gcagatgaagaacctttggtgtatgccaccaagcaggaggccaaaaatgcttttaaagct
ctattagaatcagccaatgtgggatctgactggacttgggatcagacagtgcgagcaata
gccaatgacaaacggtatggagcactgaaaattcatggtgagaggaagcaggcattcaat
gagtacttaatgcaaaggaagaaactggaggctgaggagaggcgcctgagacagagaaaa
gccaaggaggaattcacgaagatgttggaagagtccaaggaacttacatcatcaacaaga
tggagcaaggcagtaacaatgtttgaagatgatgaacggttcaaggctgttgaaagagag
gcagatcgtgaagatctcttcagaaactatttagtggatcttcagaaaaaggaaaaggca
aaagctcaagaggactaccgaaagaacagattagagtatagacaattcttagaaacatgt
gggtttatcaaggtggacacacagtggcggaaagttcaagatctcttggaagacgatgaa
agatgctcgcgccttgaaaaaattgatcgcttggaggttttccaggaatatattcgtgac
ttggagaaggaagaggaagagcaacggaaaacacaaaaggaacaattgagacgtgctgag
cgcaagaaccgtgatgcttttcgtaatatgatggcagaccatattgctgctggcacagtc
actgctaaaacactatggcgtgattattgtccaatggtgaaggagtctgtggcttatcag
gctgttgcatccaacacttcaggttctacaccaaaggatttgtttgaagatgttgtggaa
gagttggaaaatcagtatcatgaagacaaaacacgtgttaaaaatgtcttgaagtcagaa
aagataacattctcaccattatggtcatttgaggactttaaagctgctattctggaaacc
attggtaccccatccatttctgaggttaatttgcagctcatatttgaggaccttatggag
agagccaaggataaggaagagaaagaagctaaaaagcgtcaacggcttgcaaaagatttt
gttgagatgctgagcattgttgatgaaataactgctgcttctagttgggaggaatgcaaa
gagcttgtggaggatagctcagaatacaaagctattggagacgagacaaccttgagggaa
atctttgaggaatatgttactcgcttgcaggagaaggcaaaagaaaaggaacgcagacga
gaggaggaaaaggttaaaaaggataaggaaaaagaggagaaagaaaagagaaaagataaa
gagagaaaagagaaggacaaggagaaggaagagcagcgtgaaagagaaaaggagaaggga
aaagaacgttcgagaaaggatgatgctgatagtgagagtgtagatttcgttgaatatgaa
cacaaagaagataaaaagagggataaggacaaagataggaaacatcggaaacggcaccat
agctctactgatgatgtgacttctgataaggatgagaaagaggaaactaagaagtctcgt
cgacatagtggtgaacggaagaagtcaaagaagcatgcacattcacctgaatcagacggt
gaaagtcgacgcaagagacacaaaaaagaacgcgatgcatctcgtcgtagtggtggatac
gaagagctggaagatggtgaactcggtgaggatggtgaaattcagtag
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