Ipomoea triloba (trilobed morning glory): 116026605
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Entry
116026605 CDS
T07384
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116026605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116026605
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116026605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
116026605
NCBI-ProteinID:
XP_031123791
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Position
8:4474819..4476736
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AA seq
386 aa
AA seq
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MDDSDRNKLFLGGVSWETTDDTLRHHFSKYGTVVSSVIAKDRNTGNPRGFAFVSFSDPSA
VDTALQDTHEILGRTVEVKRAIPKSEQQQNRGLNRNGRANGRNNDQFRTKKIFVGGLSAN
LTEEEFKSYFERFGRITDVVVMHDNMTHRPRGFGFITFDSEDAVEEVMQKNFHELCGKLV
EVKRAVPKDGSISNIGYNARVTSGSSSTIGDYQHGNYPAYSPRYGVYPAYGPVTGYGSAA
AAGYPYGAGMVGGGFPSGAGAYGGIGYGVASFQPRSPWNVPAMAGPRGSPVLYGGTAFYP
AYMNGGAGAMSLSASGFNEFLGTGMNGKSGQFGMGVESQGASGSVHSQIGRGGVDFNSFG
SLGAASSNQSRRGNDENKSYSAGNSN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggatgattccgaccggaacaagctctttcttggaggggtttcctgggagaccaccgac
gacaccttgagacaccatttttccaagtatgggactgtggttagctccgtgatcgccaag
gatcggaataccggtaaccccaggggtttcgcttttgtctccttctctgacccttccgcc
gtcgacaccgcccttcaagacacccatgaaattctcggtagaacggtagaggtgaaaaga
gccatacccaaaagtgaacagcagcagaataggggattgaataggaatggtagggctaac
ggtaggaacaatgaccagtttaggaccaagaagatttttgtagggggtttatcagctaat
ctaactgaggaagagttcaagagttatttcgaaaggtttggtaggatcacagatgtagtt
gtgatgcacgacaacatgactcataggccgcgggggtttgggtttattacgttcgattcc
gaggatgcagttgaggaagtgatgcagaagaatttccatgagctgtgtggcaaactggtg
gaggtcaagagggctgtgccgaaagatggtagtattagtaatattgggtataacgcgagg
gtaacgagcggaagcagttctaccattggcgattaccagcacgggaattatccggcttat
agtcctagatatggagtttaccctgcttatgggcctgttacgggatatggaagtgctgct
gctgctgggtatccgtatggagctggaatggttggaggcggttttccttctggagcggga
gcgtatggtggaattgggtatggtgttgcttcgtttcagcctaggagtccttggaatgtc
cctgcaatggctgggccgagaggaagtccagtgctttatggcgggactgccttctatccc
gcttatatgaatggtggtgccggggcaatgagcttgtctgcgagcggattcaatgaattt
ttaggaactgggatgaacgggaagtctggtcagtttggcatgggagttgaatctcaaggg
gcatccggttcggtgcattctcaaattggcaggggaggtgtagattttaattcctttggt
tctctcggtgctgctagtagcaatcagagccggagaggtaatgacgaaaacaaatcttac
tctgctggtaattctaactga
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