Isoptericola variabilis: Isova_0417
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Entry
Isova_0417 CDS
T01520
Name
(GenBank) ABC-type transporter, integral membrane subunit
KO
K15771
arabinogalactan oligomer / maltooligosaccharide transport system permease protein
Organism
iva
Isoptericola variabilis
Pathway
iva02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Isova_0417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iva02000
]
Isova_0417
Transporters [BR:
iva02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
Isova_0417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TM_PBP2_N
BPD_transp_1
DUF6480
Motif
Other DBs
NCBI-ProteinID:
AEG43214
UniProt:
F6FTM1
LinkDB
All DBs
Position
439747..441387
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AA seq
546 aa
AA seq
DB search
MATHSVTPAAPPSAGAPPGGGRRTGEPHARAWSGTGLGFVVKLVLMALVNAVGVAVAWAA
WDVGSWGVLAGTVLLTVVANWVYFSRRRLAGKYVLPGLAFLLVFQLFTMAYTVYVATTNY
GTGHNSTREQAVDALLIQSERAVDDAPTYPLTIVERDGEVGFAVVEGGRVLVGTADEPLT
PVPDAATDGERVTSLPGWEVVGRARLLGDPQLQEDVLALRVPVSEDADDGSIRTREGTRA
TVYRSSLEWDPDAGTMTDVESGVVYAPSEDGRFVAPDGTALPVGWIVGVGFENFVRAFTD
TNYAGPFWRITGWTFAFAFLTVATSFLLGLAMALVFNDVRVRGRSVLRTLFILPYAFPAF
LSALLWRGMLNPNPDYGIVNNLFFFGARIEWLTDPWLAKAAILGVNLWLSFPYWFLVCTG
ALQSLPGDLTEAARIDGAGRWRAFRSITLPLLLVSTTPLLIASFAFNFNNFVIIYMLTNG
GPRFTDTSAPLGHTDILITMIYQISGVAGGRADYGLASALSILVFLVVGGISALAFRRTR
KLEEVL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcacagcgtcacgccggcggcgcccccctccgcgggggcgccgcccggcggc
ggccgccggacgggcgagccgcacgcgcgcgcctggtcgggcaccggcctcgggttcgtg
gtcaagctcgtcctcatggcgctcgtcaacgccgtcggcgtcgccgtggcgtgggcggcg
tgggacgtcggctcctggggcgtgctcgccgggacggtgctgctcaccgtcgtcgcgaac
tgggtgtacttcagccggcgccgtctggcgggcaagtacgtgctgcccggcctggcgttc
ctgctggtcttccagctcttcaccatggcctacacggtctacgtggccacgacgaactac
ggcaccggccacaactcgacccgcgagcaggcggtcgacgcgctgctcatccagagcgag
cgcgcggtcgacgacgccccgacgtacccgctcacgatcgtcgagcgcgacggcgaggtc
gggttcgccgtggtcgagggcggccgggtcctggtcggcacggcggacgagccgctcacg
ccggtgcccgacgccgcgaccgacggcgagcgggtcacttcgctgcccgggtgggaggtc
gtcgggcgtgcccggctgctgggcgacccgcagctccaggaggacgtgctcgcgctgcgg
gtcccggtctccgaggacgcggacgacggctcgatccgcacgcgcgagggcacgcgcgcg
acggtctaccgctcctcgctcgagtgggaccccgacgcgggcaccatgaccgacgtcgag
agcggcgtcgtgtacgccccgagcgaggacggccggttcgtcgcgcccgacggcacggcg
ctgccggtcggctggatcgtcggcgtcgggttcgagaacttcgttcgcgccttcaccgac
accaactacgcggggccgttctggcgcatcacgggctggacgttcgcgttcgcgttcctc
accgtcgccacgagcttcctgctcgggctggcgatggcgctcgtcttcaacgacgtgcgg
gtgcgcggccggtccgtgctgcgcacgctgttcatcctgccgtacgcgttcccggcgttc
ctgtccgcgctgctgtggcggggcatgctcaacccgaaccccgactacgggatcgtcaac
aacctgttcttcttcggcgcccgcatcgagtggctcaccgacccgtggctcgccaaggcg
gcgatcctgggcgtcaacctgtggctgagtttcccgtactggttcctcgtgtgcaccggg
gcgctgcagtcgctgcccggcgacctgaccgaggccgcccggatcgacggcgccggccgg
tggcgcgcgttccgctcgatcacgctgccgctgttgctcgtgtccacgactccgctgctc
atcgcgagcttcgcgttcaacttcaacaacttcgtgatcatctacatgctcacgaacggc
gggccccggttcaccgacacgtcggccccgctggggcacaccgacatcctcatcacgatg
atctaccagatctccggcgtcgcgggaggtcgcgccgactacggcctcgcgagcgcgctg
tcgatcctcgtgttcctcgtggtcggcgggatctcggccctcgcgttccggcgcacccgc
aagctcgaggaggtgctgtga
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