Isoptericola variabilis: Isova_0598
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Entry
Isova_0598 CDS
T01520
Name
(GenBank) Fibronectin type III domain protein
KO
K20276
large repetitive protein
Organism
iva
Isoptericola variabilis
Pathway
iva02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Isova_0598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
fn3
Cadherin_5
Pur_ac_phosph_N
ChitinaseA_N
Interfer-bind
DUF4959
Motif
Other DBs
NCBI-ProteinID:
AEG43385
UniProt:
F6FVB2
LinkDB
All DBs
Position
634247..640339
Genome browser
AA seq
2030 aa
AA seq
DB search
MTPGGALGAFTRFQQGDRRTIASTAAVVVLSAGIATAAVLYDGEATADVDLDDSGVWVTK
ESAGLVGRFNTQAQAIDGTLLAGSAAFDVAQEAGDVVVADDGNSAASVVDVARLKFASST
VVPPGAHVAMGGGTVAVLDDESASLWVVPVDRLPGLDTGKVDPTVELEGAGEVVVSRDGT
AYAVVPSTDTLWTVPVDGEPSSRELGLLDRGDDVVLTTVGDEPVVLDRSDARLRLPGGDV
VEVADAQGARLQHPGPATDGVAYATSSGLVVQPLDGGAAVTRRASGVPAAPVQLGGCLYG
AWSQTGQVVRDCEGTDRDVDRVLEGIDQSTRLEYRVNRNAVVLNDLTSGTLWMALDEYEK
VDDWDVQLPERADGEDANAEDAKPELVDQTVVDRERQDPPVAEDDSYGVRPGRSTVLDVL
SNDLDPDGDVITARLVGDQPAPLTVERVLGGKALQAVVPGDASGSVRFRYEVSDGRGGTD
EANVDVRVVPWDENAAPEQTGEPVLRVQRGGAGQIKVLPFFRDPDGDDVYLATASATVQG
DEVRAYPDGTVEFRDGGSATGRKKVTLTVGDGRGEVVEGTLWVDVLGDGNEPPVAVGDHV
VVTAGEPVTVEPLANDSDPNGDELRLVSVSQDAPAEVTPNYDAGTFTFLSHEPRSYDLLY
QVSDGPATTTGVVRVDVLDPDAADGPPVVVSDTVMLPAGGSALVDVLANDTDPAGGVLVV
QSVRVPEDAGVSVAVLAHQMLRVTETRRIADPVVLEYTVSNGAHTATGEVRVLPVPAPER
LQPPNAVADEVTVRVGDYVNVPVLANDTHPDGLELELVGDLEQQVDPALGEAFVSEDRLR
FRAGSQAGTGYAIYKVRDRNGQEDSAQVTIHVRDGEDNAPPVPRDVEARVLAGGTVRVHV
PLDGIDPDGDSVQLTGLASGPTQGRAEVVDGYVDYAASERAEGGDSFRYTVQDARGAVAT
GTVRVGIARPPETNQPPVAVDDHVTVRPERRVAVPALLNDSDPDGDQIGLVPGATQGGDE
VSPEVVDDRIVVQTPADEGTYTFYYSIEDTYAARASAAVSVTVAADAPLLPPIARDDSVP
VAEILGRTSVTVPVLDNDEDPDGAASELEVTTDAPTATVTEDGEVEVELTASRQVVTYMV
TDVDGLQAKAFLVVPGLTDAEPILRPGQAPLEVLSGEPLEIDITDHVLVVEGRTPRLTAS
DQVTAVEGEVAVSGPTTMTYTSDEGYQGPAAVTFEVTDGTGPDDPDAATAVLTLPITVLP
PENLPPEPGSPTGQVAAGEESAVDLGRFATDPDEDELRFALGSLPSGLGATLAGSRVTLE
AAPDVPKGTVLRVPYTVTDDQHPPVDGTLTVEVVASTRPLARAVEDVVDDAHQGRPVSVP
VLANDSNPFADREPLRVVGQPIIETGAGGTVVDGDQVVVTPAQDFVGTMVVRYRVEDATK
DPDRQVEGRITINVLGRPEAPARPHVEEVRSQTVVLSWTPPVNNGSEITSYTVRSDKGDT
FECATTTCTLEGLTNNVTYTFTVEATNAVGTSDPSPASAEARPDQRPDPPAAPTLTFGDR
SLVVTWENATYSDRSPIQSVNLEISPAPANGQTQKVGVTGNRIVWEGLTNGTAYKVRLQA
VNLAPEPSEWGEWSATEIPAGPPAAPAAPTAQRVDDPVGGRVRVTWQAPDGNGDTNMTYH
LDEYRDGTRTGTTYTTKNTAYAIEGLDDSSNYSFTVRAENKAGTGQASPRSNAVMPYGTP
TVPPTPSARLLADTDGKAQVSWGATADFRGPGGYYRVRAIDGAGNVLGPRNGASPYTFTG
LTNGRNYVFEVQACNDHTCSAWSARSNSVSPYTVPGTPGVTWHKATATDGHFTVRGTAND
GGRPIQRIEWRLSGDEVREGSRSAGQGWPFDVGVGGGYSKSYTLQARACNAAGCGAWASD
SGRTDAKPQPSFTVGRGSSAVGQPNCTHSSCGWLTLTIRDAAPNTSFSYVCQSSTGQISS
SWQNRMRNGTQARTDGNGNFGEVEAWCYYGRPGQQVWIETSIGTTQRMTW
NT seq
6093 nt
NT seq
+upstream
nt +downstream
nt
atgacaccggggggagcattgggcgcgttcacgcgtttccagcagggggaccgcaggacc
atcgcctcgacggcggccgtcgtcgtgctgtccgcgggcatcgccacggcggcggtgctc
tacgacggcgaggcgacggccgacgtcgacctcgacgactccggcgtctgggtcacgaag
gagtcggccggcctcgtcgggcggttcaacacgcaggcccaggccatcgacggcacgctc
ctcgcgggcagcgcggccttcgacgtcgcccaggaggccggcgacgtcgtcgtcgcggac
gacggcaacagcgcggccagcgtcgtcgacgtcgcgcggctcaagttcgcctccagcacg
gtcgtccccccgggtgcccacgtcgcgatgggcggcggcacggtcgccgtgctcgacgac
gagagcgcctcgctgtgggtcgtgcccgtcgaccggctccccggcctcgacaccggcaag
gtggatccgaccgtcgagctcgagggcgccggcgaggtcgtggtctcgcgggacggcacc
gcgtacgcggtcgtgccgtcgaccgacacgctgtggaccgtcccggtcgacggcgagccg
agctcgcgcgagctgggtctgctcgaccgcggtgacgacgtcgtcctgacgaccgtcggc
gacgagccggtcgtcctggaccgcagcgacgcgcgcctgcggctccccggcggcgacgtc
gtcgaggtcgcggacgcgcagggggcgcggctgcagcacccggggcccgcgacggacggc
gtcgcctacgcgacgtcgtcgggcctggtcgtgcagccgctcgacggcggtgccgcggtc
acgcggcgagcctcgggcgtgccggcggcgcccgtccagctcggcggctgcctctacggc
gcgtggtcgcagacgggccaggtggtccgcgactgcgagggcacggaccgcgacgtggac
cgggtcctcgagggcatcgaccagtcgacgaggctcgagtaccgggtcaaccgcaacgcc
gtcgtgctcaacgacctcacctccggcacgctgtggatggccctcgacgagtacgagaag
gtcgacgactgggacgtccagctccccgagcgcgcggacggcgaggacgccaacgcggag
gacgccaagcccgagctcgtcgaccagacggtggtcgaccgcgagcgccaggacccgccc
gtcgccgaggacgactcgtacggcgtgcggccgggccgctcgaccgtgctcgacgtgctg
tcgaacgacctcgaccccgacggcgacgtcatcacggcgcggctcgtcggcgaccagccc
gcgccgctgacggtcgagcgcgtgctcggcggcaaggcgctgcaggccgtcgtgccgggc
gacgcgagcgggtcggtgcggttccgctacgaggtgtccgacggccgcggcggcaccgac
gaggcgaacgtcgacgtccgggtggtcccgtgggacgagaacgcggcgcccgagcagacg
ggcgagccggtgctgcgggtgcagcgcggcggcgccgggcagatcaaggtcctgccgttc
ttccgcgacccggacggggacgacgtgtacctcgccacggcgtcggcgaccgtgcagggc
gacgaggtccgggcgtacccggacggcacggtcgagttccgcgacggcgggtcggcgacg
ggccgcaagaaggtcacgctcacggtcggtgacggccgcggcgaggtcgtcgagggcacc
ctgtgggtcgacgtgctgggcgacggcaacgagcccccggtcgcggtgggcgaccacgtg
gtcgtcacggcgggcgagccggtcacggtcgagcccctggccaacgactccgacccgaac
ggcgacgagctgcgtctcgtgtcggtgagccaggacgccccggccgaggtcacgcccaac
tacgacgcgggcaccttcacgttcctgtcccacgagccgcgctcgtacgacctgctctac
caggtgtcggacggcccggcgacgacgacgggcgtcgtgcgcgtcgacgtgctcgacccc
gacgcggcggacgggccgccggtcgtcgtgtcggacacggtgatgctgcccgcgggcggc
tctgcgctggtcgacgtgctcgcgaacgacaccgacccggcgggcggcgtgctcgtcgtg
cagtcggtccgcgtgcccgaggacgccggcgtgtcggtcgccgtgctcgcgcaccagatg
ctgcgggtcaccgagacgcgccggatcgccgaccccgtggtgctcgagtacacggtgtcg
aacggcgcgcacaccgccacgggcgaggtgcgcgtgctgcccgtcccggcacccgagcgt
ctccagccgcccaacgcggtggccgacgaggtcacggtgcgcgtgggcgactacgtgaac
gtcccggtgctcgccaacgacacccaccccgacgggctcgagctcgagctcgtcggcgac
ctcgagcagcaggtcgaccccgcgctcggcgaggcgttcgtgtcggaggaccgcctgcgg
ttccgggccgggtcccaggcgggcacggggtacgccatctacaaggtgcgcgaccgcaac
ggccaggaggactcggcccaggtcacgatccacgtgcgcgacggcgaggacaacgccccg
cccgtgccgcgcgacgtcgaggcgcgcgtcctcgccggcgggacggtgcgcgtgcacgtg
ccgctcgacggcatcgaccccgacggcgactcggtccagctcacgggcctggcgagcggc
ccgacccagggccgggccgaggtggtcgacgggtacgtcgactacgccgcctccgagcgg
gccgagggcggcgacagcttccggtacacggtccaggacgcccgcggggctgtcgcgacc
ggcacggtgcgcgtcggcatcgcgcgcccgccggagacgaaccagccgccggtcgcggtg
gacgaccacgtgaccgtccggcccgagcgtcgcgtcgcggtgccggccctgctcaacgac
tccgacccggacggcgaccagatcggtctcgtcccgggcgcgacccagggcggcgacgag
gtgtcgcccgaggtcgtcgacgaccgcatcgtcgtgcagacgcccgccgacgagggcacc
tacacgttctactactcgatcgaggacacgtacgcggcgcgcgcctcggccgcggtgagc
gtcacggtcgccgccgacgcgccgctgctgccgccgatcgcgcgcgacgactccgtgccg
gtcgccgagatcctcgggcgcacgagcgtgacggtccccgtgctcgacaacgacgaggac
ccggacggggccgcgagcgagctcgaggtcacgaccgacgcgccgaccgccacggtgacc
gaggacggcgaggtcgaggtcgagctcacggcgtcgcgccaggtcgtcacgtacatggtg
accgacgtcgacgggctgcaggccaaggcgttcctcgtcgtgcccggcctgacggacgcc
gagccgatcctgcgcccgggccaggcgccgctcgaggtgctctcgggcgagccgctggag
atcgacatcaccgaccacgtgctggtcgtcgagggccgcacgccgcggctcaccgcctcg
gaccaggtgacggcggtcgagggcgaggtcgccgtgagcggcccgacgacgatgacctac
acgtcggacgagggctaccagggcccggccgccgtgacgttcgaggtgaccgacggcacg
gggccggacgacccggacgccgcgaccgcggtcctgacgctcccgatcacggtgctcccg
ccggagaacctgccgcccgagccgggctcgcccaccgggcaggtcgccgcgggcgaggag
agcgcggtcgacctcggccggttcgcgaccgaccccgacgaggacgagctgcgcttcgcg
ctcggcagcctgccgtccgggctcggggccaccctcgcgggctcgcgcgtcacgctcgag
gcggcgcccgacgtgcccaagggcaccgtgctgagggtgccgtacacggtcacggacgac
cagcacccgccggtcgacggcaccctcacggtcgaggtggtcgcgtccacgcggccgctc
gcccgcgccgtcgaggacgtcgtcgacgacgcgcaccagggccgcccggtgtccgtgccc
gtgctcgccaacgactcgaacccgttcgcggaccgtgagcccctgcgcgtcgtgggccag
ccgatcatcgagacgggcgccggcggcaccgtggtcgacggcgaccaggtcgtcgtcacg
cccgcgcaggacttcgtgggcaccatggtcgtccgctaccgcgtggaggacgcgaccaag
gacccggaccgccaggtcgagggacgcatcacgatcaacgtgctcggccggccggaggca
cccgcgcgtccgcacgtcgaggaggtccgctcgcagaccgtcgtgctgtcgtggacgccg
cccgtcaacaacggctccgagatcacctcgtacacggtgcgctccgacaagggcgacacg
ttcgagtgcgcgacgacgacgtgcacgctcgagggcctgaccaacaacgtcacgtacacg
ttcacggtcgaggcgacgaacgccgtcgggacctccgacccgtcgcccgcctccgccgag
gcgcggccagaccagcggccggacccgcccgccgcgcccacgctgacgttcggcgaccgc
tcgctcgtcgtcacctgggagaacgcgacctactccgaccggtcgccgatccagtcggtc
aatctcgagatctcgccggcgcccgcgaacggccagacgcagaaggtcggcgtcacgggc
aaccgcatcgtgtgggagggcctgacgaacggcacggcgtacaaggtgcgcctgcaggcc
gtcaacctcgcacccgagccgtccgagtggggcgagtggtccgcgaccgagatcccggcc
gggccgcccgcggcgcccgccgcaccgaccgcccagcgcgtcgacgacccggtgggcggg
cgcgtgcgcgtcacgtggcaggcgcccgacggcaacggcgacacgaacatgacctaccac
ctcgacgagtaccgcgacgggacgcggacggggacgacgtacacgacgaagaacacggcg
tacgcgatcgagggcctcgacgactcgtcgaactacagcttcacggtgcgcgccgagaac
aaggcgggcaccgggcaggcgagcccgcgctcgaacgcggtcatgccgtacggcacgccg
accgtcccgcccacgccgagcgcgcgcctgctcgccgacaccgacggcaaggcccaggtg
tcctggggagccacggccgacttccgggggccgggcgggtactaccgcgtccgggcgatc
gacggcgccggcaacgtcctcggcccgcgcaacggcgcgtcgccgtacacgttcaccggc
ctgaccaacgggcggaactacgtgttcgaggtccaggcctgcaacgaccatacgtgctcc
gcctggtcggcgcgctccaactccgtctccccgtacacggtcccgggcacgcccggcgtg
acgtggcacaaagcgaccgccacggacggccacttcacggtgcgcggcaccgcgaacgac
ggcggccgcccgatccagcggatcgagtggaggctgtccggggacgaggtcagagagggc
tcgcgcagcgccggccaggggtggcccttcgacgtcggcgtcggcggcgggtactcgaag
agctacacgctccaggcgcgcgcctgcaacgccgccggctgcggcgcgtgggcgagcgac
tccgggcggaccgacgccaagccgcagcccagcttcaccgtgggccgcggcagcagcgcc
gtcgggcagccgaactgcacgcacagctcgtgcggctggctcacgctgaccatccgggac
gcggcgccgaacacgtcgttcagctacgtgtgccagtcctcgacggggcagatctcgtcg
tcgtggcagaaccggatgcgcaacggcacgcaggcccgcaccgacggcaacggcaacttc
ggcgaggtcgaggcgtggtgctactacggccgaccgggccagcaggtatggatcgagacc
agcatcggcaccacgcagcggatgacgtggtga
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