Jejubacter calystegiae: FEM41_13770
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Entry
FEM41_13770 CDS
T05975
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
izh
Jejubacter calystegiae
Pathway
izh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
izh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FEM41_13770 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
izh03400
]
FEM41_13770 (uvrB)
DNA repair and recombination proteins [BR:
izh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FEM41_13770 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FEM41_13770 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SBDS_domain_II
UB2H
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
QCT20632
UniProt:
A0A4P8YPQ0
LinkDB
All DBs
Position
3003031..3005046
Genome browser
AA seq
671 aa
AA seq
DB search
MSKALKLHSAFQPSGDQPDAIKRLCEGLDDGLAHQTLLGVTGSGKTFTIANVIANLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLVDQRSILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDEIALRVELFDDEVERLSLFDPLTGHVESTVQR
YTIYPKTHYVTPRERIIQAMEEIKVELADRRKVLLANDKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMFRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYEMEKSGGDVIDQVVRPTGLLD
PMIEVRPVATQVDDLLSEIRQRAARNERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGQAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILALG
QGLARTKAKGRGRGRAAAAPEAAEMTPKALQQKIQQLEEQMMQHARDLEFEEAAALRDQI
HQLRELFIAAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcgttaaaactccactccgccttccaaccttccggcgaccagcctgatgcc
attaaacgcctctgcgaggggctggatgacgggctggcgcaccagactctgctgggggta
accggctcggggaaaaccttcactattgccaacgtcatcgcgaatttgcagcgccccacc
atggtgctggcgccgaacaaaaccctggcggcgcagctgtatggcgaaatgaaggagttc
ttcccggaaaacgcggtggagtatttcgtctcttattacgattactatcagcccgaagct
tacgtgcccagctccgatacctttattgaaaaagatgcctctgtgaacgagcacatcgag
cagatgcgactgtcggccaccaaagcgctgctggagcggcgcgatgtggtggtggtggca
tcggtatccgctatctatggtctgggcgatcccgacctctacctgaagatgatgctgcat
ctgaccgtcgggatgctggtggatcagcgttcgattctgcggcgtctggcggagctgcaa
tacacccgtaacgatcaggcgttccagcgcggcaccttccgggtgcgcggcgaggttatc
gatatcttcccggcggaatccgacgagatagcgctgcgggtggagctgttcgatgacgaa
gtggagcggctgtcgctgttcgatccgctgaccggccacgtggagtccacggtgcagcgc
tacaccatctaccccaaaacccactatgtgacgccgcgcgagcgcatcatccaggcgatg
gaagagatcaaagtcgaactggccgatcgccgcaaagtgctactggctaacgataaactg
ctggaagagcagcgcctgagccagcgtactcagttcgatctggagatgatgaacgagctg
ggctactgctcgggcatcgaaaactactcacgctatctttccgggcgcggcccgggcgag
ccgccgccgaccctgttcgactatctgcccgcagacggactgctggtggtggatgaatcc
cacgtgaccattccccagattggcggcatgtttcgcggcgaccgggcgcgtaaagagacc
ctggtagagtacggttttcggctgccgtcggcgctggataaccgcccgctgaagtttgaa
gagttcgaggcgctggcgccccagaccatctacgtttccgcgacgccgggcaattacgag
atggaaaaatccggcggcgatgtgatcgatcaggtggtgcggcctaccggcctgctggat
ccgatgatcgaggtccgaccggtagcgactcaggtggacgatctgctgtcggagatccgt
caacgtgccgcacgcaacgaacgggtgctggtgaccaccctgaccaaacgcatggcggaa
gacctgaccgaatatctggaagagcacggggagcgggtacgctatctgcattcggatatc
gataccgtggagcggatggagattattcgcgacctgcgactgggcgaattcgatgtgctg
gtggggatcaacctgctgcgagaggggctggatatgccggaagtctcgctggtggcgatt
cttgatgccgataaagagggcttcctgcgttcagaacgctccctgattcagaccattggc
cgcgctgcgcgtaacgttaacggccaggcgattctgtacggcgataagattactccttcc
atggcgaaggcgattggcgaaaccgaacgccgtcgcgagaagcagcagcgctataacgaa
gagcacggcattgtgccccaggggcttaacaagaaggtggtggatattctggcgctgggc
caggggctggcgcgcaccaaagcgaagggacgcggtcgcggtcgggcggccgcagcgccg
gaagcggcagagatgacgccgaaggcgctgcagcagaagattcagcaactggaagagcag
atgatgcagcacgcccgggatctggagttcgaagaggcggcggcgttgcgcgaccagatt
caccagctgcgcgaactgtttatcgccgcttcttga
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