Janthinobacterium sp. B9-8: VN23_07865
Help
Entry
VN23_07865 CDS
T04271
Name
(GenBank) RND transporter
KO
K18138
multidrug efflux pump
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab01501
beta-Lactam resistance
jab01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VN23_07865
01503 Cationic antimicrobial peptide (CAMP) resistance
VN23_07865
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jab02000
]
VN23_07865
01504 Antimicrobial resistance genes [BR:
jab01504
]
VN23_07865
Transporters [BR:
jab02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VN23_07865
Antimicrobial resistance genes [BR:
jab01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VN23_07865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
AMC34522
UniProt:
A0A0X8GKR8
LinkDB
All DBs
Position
1750242..1753337
Genome browser
AA seq
1031 aa
AA seq
DB search
MFSKFFINRPIFASVISIVIMLAGLAAMFSLPIQQYPDIVPAVVSVSANYPGATAETIAQ
TVASPLEQQINGVDNMLYLQSKSAANGQMNMNVYFAVGTNPDQATIDVNNRVQAALAKMP
DEVKRQGVTVRKKSTEVLSVVSLGSPTGQYDRNFIANYALLNILDDLKRIPGVGDASMMG
GTDYAMRIWLKPDRLAQLKLTPADVVKAVQEQNSQFAAGKLGAEPDNDPVDFTYTINAKG
RLADPKEFEAIIVKSMPDGAKIRLKDVARVEMGGNDYDISGMRNGKPSVGLVTYAQPGAN
ALDVSKAIANKMQELSTRFPQGMDHAIPYDTTKFVKTSIEKVVTTLLEAMVLVFCVVYLF
LQNFRATLIPCIAVPVSLLGTFAGLAMFGFSINLLTLFGMVLAIGIVVDDAIVVLENVER
IMRETGCSAKEASIQAMQEVSGPVVAIVLVLCAVFLPVAFMSGMTGVMYQQFAITISISV
IISGIVALTLSPALCALLLKPGHHEPARFFVWFNRFFERITGGYIAGVKFLNRRVGVAFV
LFAGILASTAALYVLVPGSLVPAEDQGTMFVSVALPDAASLARTRQVSAESDTALNKLAE
VNNVTTFTGFDILSGSKLTNHATSFVTLTPWDERKGKGQDSFSLAEKAMQNASPIQNGLI
AAFTPPPIMGMSTTGGLEGYLQDRNGAGSQALSTATQKLIEAAKKRPEFAKVTTTFRADV
PQYFVDLDREKAKALGVNINDVFSTMQATLGQLYINDFNRFGRTYKVQLQSEAQYRKRPQ
DLSNIFVRSAKGDMIPLTSLVTIKDTSGPELVERFNIFGAAKIMIQPAAGISSGEAIKAM
ESVTAVALSSDYTLAWTGSAYQEKEASGTAGIAFLLGIVMVFLILAAQYERWSLPFAVIT
SVPFALFGALLAAYMRDMNNDVYFQIGMVTLIGLAAKNAILIVEFAVMKFEEGMSLSDAA
IEAARLRFRPIIMTSLAFILGCVPLITSSGAGANSRHSLGTPVIGGMLAATFIAIFFIPL
FFRLIMGLKNK
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaaattctttatcaaccggcccatctttgcctcggtgatttccatcgtgatt
atgctggcaggcttggccgcgatgttttcgctgcctattcagcaatatccggatattgtg
cctgctgtggtttcggtgagtgccaactaccccggcgctacggcagaaaccattgcgcaa
accgtagcgtcccccttggagcaacagattaacggcgtagacaatatgctgtatctgcaa
tccaaatcggcggcaaacgggcaaatgaatatgaacgtctattttgccgttggcaccaac
cccgaccaagccaccattgacgttaacaatcgcgtgcaggcggcgctcgccaaaatgccc
gatgaagtcaaacggcaaggcgtcaccgtcagaaagaaatcaaccgaagtactatcggtg
gtctccttaggctcgcctaccggccagtatgatcgcaactttattgccaactacgccctg
ctcaatattctggatgatctaaaacgcatccccggcgtgggggatgccagcatgatgggc
ggcaccgattacgccatgcggatctggctaaagcctgatcgcctggcacagcttaagctc
acgcctgccgatgtagtaaaagccgtgcaggagcaaaactcacaatttgcagcgggcaag
ctaggggccgagccagataatgatccggttgattttacctacaccattaacgccaaaggc
cgtctggctgatccaaaagagtttgaagccattattgttaaatccatgcccgatggcgca
aaaatccgcctaaaagacgtggcccgtgtggaaatgggtggcaatgattatgatatttcc
ggcatgcgtaatggcaagccatccgtggggctagtgacctacgcccagccgggtgccaat
gcgctggatgtatccaaagctattgccaataaaatgcaggaactctctactcgctttcct
cagggaatggaccacgccattccttacgacaccactaaatttgttaaaacctcgatcgag
aaagtagtcaccaccctgcttgaagcgatggtgctggtgttctgcgtggtgtatttattt
ttgcaaaatttccgtgccacgctcatcccctgcattgccgtgccggtatccctgctcggc
acttttgcgggcttggcgatgttcggattttcgatcaatctgctcacgctatttggcatg
gtactggccatcggcattgtggtggacgatgcaatcgtggtgcttgaaaacgtcgagcgg
attatgcgcgagacaggctgctcggccaaagaggcgtcaattcaagccatgcaggaagtc
tccggcccggttgtggccattgtgctggtgctttgcgcggtgtttttgcccgtggccttt
atgagtggcatgacaggcgtgatgtatcagcaatttgccattacgatttctatctcggtg
attatttccgggattgtggcgcttaccttatcccctgccttatgcgcgcttttgctcaag
cccggtcaccacgaaccggcccgtttttttgtatggttcaaccgtttctttgaacggatt
acggggggctatattgcgggtgttaagtttctaaatcgccgcgttggcgtggcttttgtg
ctgtttgcgggtattttagccagcactgcggcgctatatgtcttggtgccaggctcctta
gtaccagcagaagatcaaggcacgatgtttgtaagcgttgccctgcccgatgccgcctcg
ctagcccgcacgcgccaagtgagcgccgaatcagataccgcgctcaacaagctagccgaa
gttaataatgtcaccacctttaccggctttgatattttatccggctccaagctcaccaat
cacgccaccagctttgtaacgctcaccccctgggacgagcgtaagggcaaggggcaggat
tcgttttcgctggcagaaaaagccatgcaaaacgccagccctatccagaatggcctgatt
gcagcctttaccccgccgcccattatggggatgtcgaccaccggcggtttagagggctat
ttgcaagatcgtaatggcgcaggctcgcaggcgctcagcacggccacacaaaagctgatt
gaggccgcaaaaaaacgccctgaattcgccaaggtcaccaccaccttccgcgccgatgta
ccgcagtattttgttgatctggatcgcgaaaaagccaaggcgctgggtgtaaatatcaat
gatgtattcagcaccatgcaagccactctgggccagctctatatcaacgatttcaaccgc
tttggccgcacctacaaagtgcagttgcaatctgaagcccaatatcgcaaacgccctcag
gacctgagcaatatttttgtacgatctgccaaaggcgacatgattccgcttaccagcctt
gtcaccattaaagacaccagcgggccagagctggtcgagcgctttaatatttttggcgca
gccaaaatcatgatccagcctgcggcaggtattagctctggagaagccattaaggccatg
gaaagtgtcaccgccgtagcgctcagcagcgattacacccttgcctggacaggcagtgcc
tatcaggaaaaagaagccagcggcacagccggcattgcctttttgctgggcattgtgatg
gtgtttttaattctggccgcgcaatacgaaagatggagcttgccatttgccgtgattacc
tcggtgccctttgcactctttggtgccctgctggccgcatatatgcgggatatgaataac
gatgtgtattttcagatcggcatggtgacgctgattggtctggcggctaaaaacgccatt
ctgatcgttgaatttgcggtgatgaaatttgaagaaggcatgagcttatctgacgccgcc
atcgaagcggcaaggctgcgcttcaggccgattatcatgacatcgctcgcctttatttta
ggctgcgtaccactgattacctcaagtggcgcaggggcaaacagccgccattcgctaggc
acgccagtgattggcggcatgctggccgctacctttattgccattttctttatcccgctg
ttcttccgcctaattatgggcctaaagaataaatag
DBGET
integrated database retrieval system
