Janthinobacterium sp. B9-8: VN23_20225
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Entry
VN23_20225 CDS
T04271
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
jab
Janthinobacterium sp. B9-8
Pathway
jab00521
Streptomycin biosynthesis
jab00523
Polyketide sugar unit biosynthesis
jab00541
O-Antigen nucleotide sugar biosynthesis
jab01100
Metabolic pathways
jab01110
Biosynthesis of secondary metabolites
jab01250
Biosynthesis of nucleotide sugars
Module
jab_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
jab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
VN23_20225
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
VN23_20225
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
VN23_20225
Enzymes [BR:
jab01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
VN23_20225
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AMC36747
UniProt:
A0A109RWJ1
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All DBs
Position
4502158..4502724
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AA seq
188 aa
AA seq
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MKITDTAIADVKIIEPLVFGDERGFFYESFNHAKFEAAIGRKVEFVQDNHSRSVKGVLRG
LHYQIQHPQGKLVRCTVGEVYDVAVDIRKLSPTFGQWVGVTLSAENKRQLWIPEGFAHGF
VVASDVAEFLYKTTDYWFPEFERSMLWNDPELNIDWPCTDQVQLSAKDKLAKVLAEAEYF
NNHSVVME
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcacagatactgcaattgccgatgtgaaaataattgaaccgctagtcttcgga
gacgagcgcggtttcttttatgaaagctttaaccacgccaaatttgaagctgcaattggc
cgtaaagttgaatttgtgcaggacaaccattcccgctctgtaaaaggggtattgcgtggc
ctgcattaccaaattcagcatccacagggcaagctggtccgctgtactgtgggtgaggtt
tacgatgtcgccgtagatatccgcaaattatcccccacttttgggcaatgggtaggggtt
acgctcagtgcagagaacaaacgccagttgtggataccagaaggctttgcccatggtttt
gtagtggcatcggatgtggcagaatttttatataaaacaacagattactggtttccggag
tttgagcgatcaatgttatggaatgatccggaactaaatattgattggccttgtacggat
caagtgcaattatctgccaaagataaattagctaaggtattggctgaagcagaatatttt
aataatcatagtgtggtgatggaatga
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