Janthinobacterium sp. 17J80-10: EKL02_04820
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Entry
EKL02_04820 CDS
T05896
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
jaj
Janthinobacterium sp. 17J80-10
Pathway
jaj01501
beta-Lactam resistance
jaj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EKL02_04820
01503 Cationic antimicrobial peptide (CAMP) resistance
EKL02_04820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jaj02000
]
EKL02_04820
01504 Antimicrobial resistance genes [BR:
jaj01504
]
EKL02_04820
Transporters [BR:
jaj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EKL02_04820
Antimicrobial resistance genes [BR:
jaj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EKL02_04820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QAU33557
UniProt:
A0A410UQB2
LinkDB
All DBs
Position
complement(1072409..1075558)
Genome browser
AA seq
1049 aa
AA seq
DB search
MAKFFIDRPVFAWVIAIFIMLAGLLAIRALPVAQYPTIAPPSVVITATYPGATAKILDES
VTSLIEQEMNGADGLQYIESESQSNGTAQITVTFVPGTNPDLAAVDVQNRIKRVEPRLPQ
AVLQQGVQVNKARSNFLLFISLVSTDGSLDPVALGDYLSRNVLNEIKRVPGVGQAQLFGT
ERAMRVWIDPAKLAGLKLTPGDVSSAIRAQNAQVSGGTLGDLPSPGTQPISASVVVSGQL
ASAEEFGRIALRANQDGSVVRLSDVATIEIGGQTYATASRTDGSPSAAIGVQLSPTANAL
GTATAVRAKMEELKKFFPAGVKYEIPYDTSLFVKISIKEVVKTLAEAVLLVFLVMYLFLQ
NIRYTLIPTIVVPVALLGTLATMLAFGYSINVLTMFGMVLAIGILVDDAIVVVENVERIM
SEEGLSPREATRKAMGQITGAIIGITLVLIAVFIPMAFFGGAVGAIYRQFSLAMVSSMVF
SAIMALTLTPALCATILKPVEAGHHHEKSGFFGWFNRHFLRASNGYRSTVGKMLGKSLRY
MVIYALIIGCVALLYARLPSSFLPSEDQGFLITNIQLPPGASTHRTLEVVKQTEEYFLKQ
PGVEHVIAVLGFSFSGRGQNAALAFVPLKDWDERGRDDSAGAIVDRAKGALSKIRDAIIF
PVNPPPIRELGNATGFTFRLQDRGGHGAEALLAARNELLGLASKSPVLKGVRPEGLEDTP
QLRLDIDRDKASALGLSFADINTTLSTAIGTSYVNDFPNQGRQQRVIVQVDAPQRLRPED
LLKLYVRNSKGTMVPLSSFATSRWTTGPVQLVRFNGYPAFRISGEAAPGRSTGDAMAEME
KLATQLPTGFGYEWTGQSYEEKTSGSQAPALFLLSLLAVFLVLAALYESASIPLAVMLVV
PLGILGSLLGANMRDLPNDVYFKVGLIAIIGLSAKNAILIIEFAKDLHAQGKGLVEATLE
AAYLRFRPIVMTSLAFILGVLPLVLASGAGSASQRAIGTGVMGGMITATVLAVFLVPVFF
VVVRRIFKGSERQRRMYAAHLEPNNGEPA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatttttcatcgaccgcccggtctttgcctgggtcatcgcgatattcatcatg
ctggccggcctcctggcaatccgtgcgctgccggtggcgcaatacccgaccatcgccccg
ccctcggtcgtaattactgccacctatcccggtgccaccgcaaaaatcctcgacgaaagc
gtcaccagcctgatcgaacaggaaatgaatggcgccgacggcttgcagtacatcgagtcg
gaaagccagtccaatggcacggcccagatcacggtgactttcgtgccgggcaccaacccg
gacctggccgcggtcgacgtgcaaaaccgcatcaagcgggtcgaaccgcgcctgccgcag
gcagtgttgcaacaaggcgtgcaggtcaacaaggcacgcagcaacttccttttgttcatc
agcctggtttccaccgatggcagcctcgatcccgtggcgctgggcgactacctgtcgcgc
aacgtgctcaacgaaatcaagcgcgtgccaggcgtcggtcaggcgcagctgttcggcacc
gaacgtgccatgcgcgtctggatcgacccggccaagctggccggcctgaagctcaccccc
ggcgacgtcagcagcgccatccgcgcacaaaatgcgcaagtctcgggcggcaccctgggt
gacttgcccagccctggcacgcaacccatttcggcaagcgtcgtagtttccggacagttg
gccagcgccgaggaattcggccgcattgccctgcgcgccaaccaggatggctcggtggtg
cgcctgtccgacgtcgctaccatcgagatcggcggccagacctatgccacagcctcccgc
accgacggcagcccaagcgccgcaatcggcgtgcagctctcgcccaccgccaatgcgctc
ggcactgccactgcagtgcgcgccaagatggaagaactgaagaaattcttcccggccggc
gtcaagtacgagatcccctacgacacctcgctgttcgtcaagatctcgatcaaggaagtc
gtcaagaccctggccgaggctgtgctgctggtcttcctggtgatgtacctgttcctgcaa
aacatccgttacaccctgattcccaccatcgtcgtgccggtggcgctcctgggcacgctg
gccacgatgctggccttcggctattcgatcaatgtgctgacgatgttcggcatggtgctg
gcgatcggcatcctggtcgacgatgccatcgtggtggtagaaaacgtcgagcgcatcatg
agcgaggaaggcctgtcgccgcgcgaagccacccgcaaggccatgggccagatcaccggc
gccatcatcggcatcacgctggtgctgatcgccgtattcatccccatggcattctttggc
ggcgcggtcggcgcgatctaccgccagttctcgctggcgatggtgtcctccatggtgttc
tcggcgatcatggcgctgacgctcacgccggccttgtgcgcgaccatactgaaacccgtg
gaagcaggccatcaccatgagaaatccggcttcttcggctggttcaaccggcacttcctg
cgcgcctcgaacggctaccgcagcacggttggcaagatgctcggcaagtcgctgcgctac
atggtgatctatgcccttatcatcggctgcgtggcgctgctgtatgcgcgtctgccatcg
tccttccttcccagcgaagaccagggctttctcattaccaacatccagttgccgccgggc
gcctcgacccaccgtacgctggaggtggtcaagcagaccgaggaatacttcctgaaacag
cccggcgtcgagcacgtcatcgccgtgctcggcttcagcttttccggacgcggccagaat
gcagccctggcctttgtaccgctgaaggactgggacgaacgcggccgagacgattccgcc
ggcgcgatcgtcgaccgcgccaagggtgccctgtcgaagatccgcgacgccatcattttc
ccggtcaatccgccgccgatccgcgaactgggcaatgccaccggtttcacgttccgcttg
caagaccgcggcggccacggtgccgaagcgctgcttgccgcgcgcaacgagcttctcggc
ctggcgtcgaaaagcccggtgctcaagggcgtgcgtccggaaggcctggaagacacgccg
caactgcgcctcgacatcgaccgcgacaaggccagcgcgctcggcttgagcttcgccgac
atcaatacaacgttgtccactgcgatcgggacgagttatgtgaatgactttccgaaccag
ggccggcagcagcgtgtgatcgtccaggtcgatgcgccgcagcggctgcgtccggaagac
ttgctgaagctttacgtgcgcaacagcaaaggcacgatggtgccgctgtcatccttcgcc
acgtcgcgctggactaccggcccggtgcaactggtacgcttcaacggttacccggcattc
cgcatttccggcgaagctgcgcccggccgcagcaccggcgacgcgatggcagagatggaa
aagctggcgacgcaattgcctaccggtttcggctacgaatggaccggccagtcgtatgag
gaaaagacctccggctcccaggcgccggcactatttttgctgtcgctgctggcggttttc
ctggtgctggcagccttgtacgaaagcgcctcgattccactggcggtgatgctggtcgtg
ccgcttggcattcttggctcgctgttgggggccaacatgcgcgacctgcccaacgacgtg
tatttcaaggtcgggctgattgccatcatcggcctgtcggccaagaatgcgatcctgatc
atcgagttcgccaaggacctgcacgcgcaaggcaagggactggtcgaggcgaccctggaa
gcggcctacctgcggtttcgcccgatcgtcatgacatcgcttgcctttatcctgggcgtg
ctgccgctggtgctggcgtcgggcgccggctcggccagccagcgtgccatcggcacgggc
gtcatgggcggcatgatcactgccaccgtgctggcggtgttcctggtgccggtattcttt
gtcgtggtcagaagaattttcaagggcagcgaacgccagcgccgcatgtatgccgcgcac
cttgaaccaaacaatggagaaccagcatga
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