Janthinobacterium sp. 17J80-10: EKL02_16120
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Entry
EKL02_16120 CDS
T05896
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
jaj
Janthinobacterium sp. 17J80-10
Pathway
jaj00521
Streptomycin biosynthesis
jaj00523
Polyketide sugar unit biosynthesis
jaj00541
O-Antigen nucleotide sugar biosynthesis
jaj01100
Metabolic pathways
jaj01110
Biosynthesis of secondary metabolites
jaj01250
Biosynthesis of nucleotide sugars
Module
jaj_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EKL02_16120 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EKL02_16120 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EKL02_16120 (rfbC)
Enzymes [BR:
jaj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EKL02_16120 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF6600
Motif
Other DBs
NCBI-ProteinID:
QAU35567
UniProt:
A0A410UW42
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All DBs
Position
3624381..3624935
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AA seq
184 aa
AA seq
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MHVIATALPNVLIFEPRVFADERGWFMESYNQAVFEKAVGHAAPFVQDNHSCSKRGVLRG
LHYQLPPYAQGKLVRATQGRVWDVAVDIRKSSATFGKWVGVELSAENRRQLWIPPGFAHG
FITLSETSEFMYKTTAPYNKESEGAIAWNDPQLAIQWPEIAAMAVILAEKDAAAPRLTDA
RLFT
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcattgccaccgcacttccgaacgtactgattttcgagccgcgcgtattcgcc
gacgagcgcggctggttcatggaaagctacaaccaggccgtgtttgaaaaagcggtggga
catgccgcgccattcgtgcaggacaaccatagttgcagcaagcgcggggtattgcgaggt
ttgcactaccagttgccgccctatgcacagggcaagctggtgcgcgccacgcaaggccgg
gtatgggatgtcgcggtcgatatccgcaagagctcagccaccttcggcaaatgggtggga
gtcgaattgagcgcggaaaaccggcgccagctctggataccgcccggctttgcccatggc
tttatcaccttgagcgaaaccagcgaattcatgtacaagacgaccgcgccttacaataaa
gaatcagaaggtgcaatcgcctggaacgatccgcaactggctatccagtggcctgaaatt
gccgcgatggcggtgattctggcagagaaggatgcggctgcgccgcgattgacggatgcg
cggttgtttacgtga
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