Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_09075
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Entry
YQ44_09075 CDS
T04539
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
jaz
Janthinobacterium sp. 1_2014MBL_MicDiv
Pathway
jaz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jaz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YQ44_09075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jaz03021
]
YQ44_09075
Transcription machinery [BR:
jaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
YQ44_09075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_24
HTH_5
Sigma70_ECF
HTH_20
HTH_10
Trp_repressor
Motif
Other DBs
NCBI-ProteinID:
APA67963
UniProt:
A0A1I9XW21
LinkDB
All DBs
Position
complement(2034838..2035347)
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AA seq
169 aa
AA seq
DB search
MSTVSPIHAAHLSTLYSEHHGWLYGWLRGKLGNRAEAADLAQDTFLRLLGKRDAAPLREP
RGYLATIARGLLIDRYRRHALEQAYLEALAQQAEPTTICAETHAIIIETLLAIDRLLDSL
GARTRAIFLLAQIEELSYVDISQRLGVSLPTVKKHLVRAYTECLLLAAC
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgtcagtcccatccatgccgcccacctgagcaccctgtacagcgaacaccac
ggctggctgtatggctggctgcgcggcaagctgggcaaccgggccgaggcggccgacctg
gcgcaggacacgtttttgcgtctgctgggcaagcgcgacgccgcaccgctgcgcgaaccg
cgcggctacctggccaccatcgcgcgcggcctgctgatcgatcgctaccggcgccacgcg
ctggagcaagcctacctggaagcgctggcgcagcaggccgagccgacaacgatttgcgcc
gagacgcacgccatcatcatcgaaaccctgctggccatcgaccgcctgctcgacagcctc
ggtgcgcgcacgcgcgccatcttcctgctggcgcaaatcgaggaattgagctacgtggac
atcagccagcgcctcggcgtgtccctgccgaccgtcaagaaacacctggtgcgcgcctac
accgaatgcctgctgctggcggcctgctga
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