Jatropha curcas (Barbados nut): 105631084 Help Entry 105631084         CDS       T03922                                  Name (RefSeq) DNA ligase 4   KO K10777   DNA ligase 4 [EC:6.5.1.1] Organism jcu  Jatropha curcas (Barbados nut) Pathway jcu03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:jcu00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     105631084  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:jcu03400]     105631084 Enzymes [BR:jcu01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      105631084 DNA repair and recombination proteins [BR:jcu03400]  Eukaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     DNA Ligase 4 complex      105631084 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N BRCT_2 DNA_ligase_A_C PTCB-BRCT BRCT RNA_ligase DNA_ligase_IV Motif Other DBs NCBI-GeneID:  105631084 NCBI-ProteinID:  XP_037497058 LinkDB All DBs Position Unknown AA seq 1158 aa AA seqDB search MTNETKFSVMVSLFEWIQKTKYPAKKRSKFRKFLDTFCKPDDYFSAIRLILPRLDRERGS YRLKESVLATCLVDALGMSRESTDAVRLFNWRKGGAKTGANAGNFSLVAFEVLQHRQGMS SGGLTVKELNDLLDSLALSENREEKTSVLSNLIKKTNAQEMKWIIMIILKDLKLGISEKS IFHEFHPDAEDLFNVTCDLKLVCEKLKDRSLRHKRQDIEVGKAVRPQLAMRVSDAHSAWK KLHGKEVVVECKLDGDRIQIHKNGAEVQYYSRNFLNHFEYGHGMSNIITQNVVADRCILD GEMLVWDSSLNRFAEFGSNQEIAKAAKDGLDSDRQLCYVAFDILYVGDTSVIHQSLRERH DLLRKFVKPLKGRLEILVPDGGLNNRRLPGEPPCSLIAYNMNDVERFFEETVKNRDEGII LKDLGSKWEPGDRSGKWLKLKPEYIQAASDLDVLILGGYYGSGRHGGEVAQFLVGLAERP AADTYPRRFISFCRVGTGLSDDELAAVVTKLKPYFRKYEYPKKSPPSFYQVTNNSKERPD VWIESPEKSIILSITSDIRTISSEVFAAPYSLRFPRIDRVRYDKPWYECLDVQSFVELVH SSNGTTQKGKDSGGLQDRKQTSVKSSKKGGRKNASVVPSHFIETDVSDVREETLIFSKMM FYFVNVPPTHSLESLHKMVIENGGTFSMNLNKSVTHCIAAENKGIKYQAAKLHGDVIHCS WVLDCCSQKKLLPLQPKYFLFLSEASKKKLQEEIDEFSDSYYWDIDLADIKQLLENINAS EDANRIEYYKRKYCPKDKWSLFYGCSVYFYLPTQFLTPDWETLLGLKSRRLKLEVLMGGG YVSNNLANATHMLVLTVPGISNIDFDALTKSFTGKDKYFLLNKRLSVIGYQWLEDSLEKQ KKLEEETYSLKPSGLQELNIEKCNYDLDNDQKLPSFPGCQTEEQGRTSFEHASISASPKR DVKRKRGGLAGRSVKKGKAGISRARKTQTRVGKPAKICEYESDENNSSDDETKGEIKMSK NAEISKKSSEIKESKTEESESSHIHMSAENEVTERREDQSSDVEICEGQRDEWFDKTPNI AKGEGQYGKEKENSEKLEVMVDPVHAMLLDMIPGLGMKKMEKPKPFPDNERPAIDPTAPP AKKKKVSYKDIAGELLKD NT seq 3477 nt NT seq  +upstreamnt  +downstreamnt atgacgaatgaaaccaagttcagtgtgatggtgagtttgttcgaatggatacagaagacc aaatacccagcaaagaagcgttccaagtttcgcaagttccttgacactttctgtaagccc gacgattacttctcagcgattcggttaattcttccaaggctcgaccgagagagaggctct tacagactcaaggagtcggtgctcgccacctgccttgttgatgctctcggaatgtccagg gagtcaaccgatgctgttcggctcttcaattggcgcaaaggaggcgccaagactggcgcc aatgccggaaatttctcactcgtcgcttttgaggtcctccaacataggcaaggaatgtca tcaggtgggctaacagtaaaggagttaaatgacttgcttgatagcttggcattgagtgaa aatagggaagaaaaaacttcagttctttccaatctgattaagaagacgaatgctcaggaa atgaaatggattatcatgataattctcaaagatttgaaattgggaattagtgaaaaaagc atatttcatgaatttcatcctgatgccgaagacttgtttaatgtcacatgtgacttaaaa ttagtttgtgaaaagttgaaggatcgaagcctaaggcataagcgccaggacattgaggtt ggaaaggctgtacgccctcaactagctatgagagttagtgatgcacattccgcatggaaa aagcttcatgggaaggaagtagttgttgaatgtaaacttgatggtgatcggatacaaata cataagaatggggcagaagtacaatactactcaaggaattttcttaatcactttgaatat ggacatggaatgtcaaacatcattactcaaaatgttgtggctgataggtgtatactcgac ggtgaaatgttggtttgggattcctctttgaatcggtttgctgaatttggttcaaatcag gaaatagcgaaggcagcgaaagatggacttgacagtgatagacagttgtgctatgttgct tttgacatcctttatgttggagatactagtgtcattcaccaaagcttaagggaaagacat gatcttctccgaaaatttgtgaagcctttgaagggccgtttagagattctagtacctgat gggggtctcaataatcgacgtcttcctggggaacctccttgttcgcttattgcttataac atgaatgatgttgagagattctttgaggagactgttaaaaatagagatgaagggatcata ttaaaagaccttggctcaaaatgggaaccaggtgatcgaagtgggaaatggctgaaattg aagccggagtacatacaggctgcttctgatttggatgttcttattttaggaggatattat ggttctgggcgtcatggaggagaggtggctcaattcttggttggtctggcagagcgccct gctgcagatacataccccaggcgattcatctccttttgcagagtgggcactggactatct gatgacgagctagctgctgttgtaaccaaactgaagccttattttaggaaatatgaatac ccaaagaagtcaccaccaagtttttatcaagtaacaaataattcaaaagagaggccagat gtgtggattgagagccctgagaaatcgattatactttctatcacaagtgatattcggact ataagctctgaggtatttgctgcaccatatagcttgagattcccacgcattgacagagtg agatatgacaagccttggtacgagtgccttgatgttcagtcatttgttgaattggtacat tctagcaatggtaccacacagaagggaaaagattctggaggcttgcaagatagaaaacaa acaagcgtaaaatcctccaaaaagggaggaagaaagaatgcatctgttgttccatctcat tttattgagactgatgtctccgatgttagggaggaaaccttgatattttcaaaaatgatg ttttactttgttaatgtgcctccaactcactctctggagtccttacacaaaatggtcatc gagaatgggggaacattttcaatgaatttaaataaatcagttacccactgtattgcagct gaaaacaaggggattaaatatcaggcagcaaagcttcatggagatgttattcattgctca tgggtattggattgttgctcacaaaaaaagctcctcccgttacagccaaagtacttcctc ttcctttctgaagcttcaaagaagaagttacaggaagaaattgatgaattttctgattct tactactgggacattgaccttgcagacatcaaacagcttttagagaacataaatgcttcg gaagatgccaatagaattgagtattataaaagaaagtattgtccaaaggataaatggtct ctcttttacggctgctctgtgtacttctaccttccaacacagtttttaacacctgattgg gagaccttgttgggacttaaatcgaggaggttgaagcttgaagttctcatgggtggtggc tatgtcagcaataatcttgcaaatgctacccatatgttggtcttgacagtgccaggaata tccaacattgattttgatgctcttacaaagagttttacaggtaaagacaaatatttcctc ttgaataagaggttgtctgtgattggatatcagtggttggaggactccttggaaaaacag aaaaaactggaagaggagacatacagcttgaagccctctggtttgcaagagttgaatatt gaaaagtgcaattatgatctggataacgaccagaaacttccatcttttcctggctgccaa acagaagagcaaggcagaacttcctttgaacatgctagtatatcagcctcgcccaagaga gatgtgaaacggaaaagagggggacttgctggcaggagtgtgaagaaaggaaaagcaggc attagcagagctcgaaaaacacagacacgcgttggaaagcctgctaaaatatgtgaatat gaatcagatgaaaacaattcatctgatgatgaaacaaaaggagagatcaaaatgagcaaa aatgcagagattagcaagaaaagttcagaaatcaaagagagtaaaacagaagagtcagaa tcatcacacatacacatgagtgctgagaacgaagttactgaaaggagagaggatcaatct tctgatgttgaaatctgtgaaggtcaaagagacgagtggttcgataaaactcctaatatt gcaaagggtgaagggcaatatgggaaggagaaagagaactctgagaaacttgaagttatg gttgatccagttcatgccatgttattggacatgattcctggtcttggaatgaagaaaatg gaaaaaccaaaaccatttcctgataatgaaaggccagctatagatcctactgcaccgcct gcaaagaaaaagaaagtcagctacaaggatattgctggtgaactgctcaaggattga

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