Jatropha curcas (Barbados nut): 105633954
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Entry
105633954 CDS
T03922
Name
(RefSeq) nuclear pore complex protein GP210
KO
K14314
nuclear pore complex protein Nup210
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105633954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105633954
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105633954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Big_2
Motif
Other DBs
NCBI-GeneID:
105633954
NCBI-ProteinID:
XP_012072052
LinkDB
All DBs
Position
Unknown
AA seq
1944 aa
AA seq
DB search
MLIRTAILAAFLLLMMEGRASLSASGPHIADVNILLPPKMTHPVEYRLQGSDGCFKWSWD
HHDILSVLPEYNLTSHCSTSARLRSIASFGGRKETAVYAADVHSGIVIRCKVFIDNISRI
QIFHNSIKLDLDGLATLRVRAFDSEDNVFSSLVGLQFMWQLIPETGELPHHLVHVPLKES
PLSDCGGLCGDLNIQIKLEDSGVFSDLYVVKGVGIGHEKVSVHLLEPQFNYLADKIILTV
AEAMSLEPPSPVFVLIGAAFHYSLKVIRGNIPQVVTLPSPHHNWSVLNTSVAEVGSKIGF
VRALYLGVTTVIVEDTRVAGHMQMSSLNVVLPDSLRLYIMPLLNSGDPVEGMKAFPSKET
WHVVSGRQYLIQMKVFSRGLDVHEIYITESDDLKLHDKHSGLWTTSLPLEDIEAKYGWHN
SRILQATSQGLGELTASLTYFSGHQETKEVIEVVQEIIVCDQVKFSLDRTSGTSQTILLP
WAPGVYQEVELKATGGCGETSSDYEWLSSDAAIVSISASGVVRAKRPGKATVRVVSAFDS
FNYDEVVVEVSIPSSMVMLQNFPVETVVGSHLLAAVTMKALNGAFFYRCDAFHSFMKWKA
GSESFVVVNATEVPPVLENPGNDELPVLVYGPSCSWTYIYASAPGQTMLHVVLSKEYDHY
DHSFHGTVILKASYRIAAYPLLVVRQVGDGNQFGGYWFDLAHVEASNQLENLEMIYLVPG
TSLDIVLLGGPERWDKGVDFIENVEVLADKHAYTENGVLVRPVSEGYQSVYRVLCQTLGV
FKLVLKRGNMVGDDHPLPAIAEVTFSLTCSIPSSIALIVDEPVNRHEAIRTAALADRSTG
QIHVSPITVANGQTIRIAAVGLDASGEAFANSSSLTLKWELTSCEGLAYWDYANEAKWSK
SSWERLLVLQNESGECIVRAAAVGLRDNGDSHYFTQLPISGMALTDAIRLQLVSKLRVNP
EFNLLFFNPTAKVNLSITGGSCFLEAAVNDSLVAEVIQSPPGLQCSQLTVSPKGLGTALV
TVYDIGLAPTIQASSVVQVAEVDWIKIVAGEEISLMEGQSTSIDLMAGINDGHTFDSNQY
AYMNIHVWIEDDIIQLVDENDAPNVGVGYINGPRFTIFAKNLGITTLYVSTKQLSGHEIL
SQPIKLEVYEPLRIHPHDIFLAPGSSYVLTVKGGPTIGVYVEFSSLDGGTATVDRSSGQL
SAISPGNTTILSTVYGNGNVVICQAYGNVRVGVPSSAILDAQSEQLDVGSDMPIYPSFPE
GDLFAFYELCKAYKWTIDDEKVLDFYKTEGLNSKSNWFQWDEEELGFIKVLHGRSAGRTT
VAVTFSCDFVSTSYSETRLYNASTSLLVVPDLPLALGVPITWVLPPHYITSSILPFSLES
HGQWDGQSRKGTITYSLLRSCEKNEVWQKDAISIDGDRIKTMESNNLACIQAKDRTTGRI
EIASCVRVAEVAQIRITSQEFPFHVIHVAIGTELHLPIRYFDALGNPFYEAHNVHYHAET
NYHDIVSIDTKNGSGTLHLKAMRHGRALLRVSFNSNPQKSDYMLISVGAHIFPQNAILHQ
GTSLDFGVEGINGQVSGRWLSANKSVISVDMPSGRAETVGIGSTQVFFESPNTKLETTVT
VVSGNIVSVDAPKQMLTNVPHPTKGYTFPVKLSGTYNKFDAVGNAKEISYDCKVDPPFLG
YAKPWVDASSGNSYCLFLPHSPEHLVRSMPRLKDMRPYISVSINASLREASHVSGSASAV
FIGGFSILEMDKSLMQLNLTPDSNKTIITVLGNTDVDIQWQNQDLIKISPIHKEDFGIGG
RAQFEVKMLKAKRLKDKIIISLPANGQRVEIDVNYEPEAEAESKTIFGGTNFPIIAVSFI
AALGTIFLVKNFVRTSHRNRPTQQHTFPSTPVRAPLTPERSSPILNEQSPRTPQPFVDYV
RRTIDETPYYKREARRRINPQNTC
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atgctaattcgaacggcaattttggcggctttccttcttttgatgatggagggaagggcg
tcgctttcggcttctggtcctcacattgctgatgttaacatacttttgcctccaaaaatg
acgcatcctgtagagtaccggcttcaaggaagtgatggctgcttcaaatggtcatgggat
catcatgatattttatctgttctacctgagtataacttaaccagccactgctcaacgagt
gctcgattgagatcgattgcttctttcggtggtagaaaggagactgcagtttatgctgct
gatgtacactcaggaatcgttattcgctgcaaagttttcattgacaacatttccagaatt
cagatattccataattctattaaactggatttggatggtcttgctactcttcgcgtccgt
gcctttgatagtgaagataacgtattctcatcattggtgggcctgcaattcatgtggcag
ctgattcctgaaactggtgaactgccccaccaccttgttcatgttcctcttaaggagtct
cccctgagtgattgtggtggactatgtggtgacttaaacatccaaataaaacttgaagat
agtggtgtattctcagatttgtatgtggtgaaaggggttggaattggacatgaaaaggtt
tctgtgcatttgcttgagccacaattcaattacctggccgataagattattttaacagtg
gcagaagcaatgtcacttgagcctccctcacctgtttttgtcctcattggtgctgctttt
cattacagccttaaagttatccgtgggaatatcccacaagtggtaactctaccatctcca
catcataattggtctgttttgaacacttctgttgctgaggtgggctcaaagataggtttt
gttcgtgcactgtacttaggcgtaaccactgtcattgtcgaagatactagagttgctggt
cacatgcaaatgtcttcgcttaatgtggttctaccagatagtttacgcttgtacataatg
ccattattgaattccggtgatcccgtggaaggaatgaaagccttcccatctaaggaaact
tggcatgttgtttctgggcgtcaatatcttattcaaatgaaggttttctcacggggactt
gatgtgcatgaaatctacattacagagagtgatgatcttaagttgcatgacaaacattct
ggtctttggacaacttccttgccattagaggatattgaggccaagtatggctggcacaat
tctagaatactgcaagcaacttcccaggggctgggagagctgacagcttccttaacttat
tttagtggacaccaggagacaaaggaggttattgaggttgtgcaagaaataatcgtttgt
gaccaagtgaagtttagtttggatagaacaagcggtacatctcagactattctccttcct
tgggccccaggtgtttaccaggaggtggaactaaaggctactggaggttgtggagaaaca
tctagtgattacgaatggctttcttcagatgcggctattgtatcaatatctgcttcaggg
gttgttcgagcaaagaggcctggtaaagcaacagtcagagtcgtgtctgcttttgattca
ttcaattatgatgaggtggttgttgaagtttctattccgtcatccatggttatgctgcaa
aacttccctgtggagactgttgtaggatcacatcttcttgctgctgtgacaatgaaagca
ttgaatggtgcctttttctatcgttgcgatgctttccattcattcatgaaatggaaagct
ggaagtgaatcttttgttgttgtcaatgcaacagaggtgccacctgttttagaaaatcca
ggaaacgatgagctgcctgttttagtttatggtccatcatgctcatggacctatatatat
gcatctgctcctggtcagaccatgctgcatgtggttctgtcgaaagaatatgaccactat
gatcattcatttcatggaactgttattttgaaagcatcatatcgtattgcagcatatcca
ctgcttgttgtgcgtcaagtaggtgatggaaaccaatttggtgggtattggtttgatttg
gctcatgtcgaagcaagtaatcaactggaaaacctggagatgatatatcttgtccctgga
acaagtttagatattgttcttcttggaggacctgaacgctgggacaaaggtgttgatttc
attgaaaatgtggaagtattggctgacaagcatgcttacactgagaatggggttcttgta
cgtccagtatctgagggatatcagagtgtgtatagagtattgtgccaaacactgggagta
tttaaattggttttaaaacgtggaaatatggttggagatgaccaccctctgccagcaata
gcagaagttactttttctcttacatgtagcattccttcttcaattgcactcatagttgat
gaacctgttaacagacatgaagctataaggacggcagctcttgctgaccgcagcacaggg
caaatccatgtcagtcccattacagtggcgaatgggcaaactattcggatagctgctgtt
ggccttgatgcttctggagaagcttttgcaaactcatcttctcttactttgaaatgggaa
ttgaccagctgcgaagggctagcatattgggattatgcaaatgaagccaagtggtctaag
tcaagttgggagaggcttttggtcttgcaaaatgaatcaggagagtgcatagttcgagct
gctgctgttggcttacgtgataacggagatagtcattattttactcagttgccaatttca
ggaatggctcttacagatgctatacgtttacagcttgtttctaaattaagagtcaatccc
gagttcaacttgttatttttcaatcccactgctaaggtaaatctttcgattactggtgga
agttgtttcttggaagctgctgtgaatgattctcttgtggcagaagttattcaatcccca
ccaggcttgcagtgctcacagttgacagtctctcctaaagggttgggaactgcacttgtg
acagtttatgatattgggcttgctcctactattcaagcttcttcagtggtccaagtagct
gaagtagactggattaagattgtggcgggagaagaaataagcctaatggagggacagtca
acatccatagatctaatggctgggattaatgatggacatacttttgactctaatcagtat
gcttacatgaacattcatgtgtggattgaggatgatataattcaacttgtagacgaaaat
gatgccccaaatgttggtgttgggtacataaatggaccgaggttcacaatttttgctaag
aatcttgggatcacaactctttatgtcagtaccaagcagctatcaggacatgaaatactg
agccaaccaataaagctagaggtctatgaaccattgagaattcacccacatgatatattc
ttggcaccaggttcatcttatgtgcttactgtgaaaggaggtccaactattggtgtctat
gttgagttttcttctttggatggtggaacagcaactgttgacagatcttctggccaatta
tctgcaatttctcctggaaacacaactatcctttccacagtttatgggaatggaaatgtt
gtgatttgtcaagcatatggcaatgttagggttggagttccttcttctgcaatattggat
gcacagagtgaacaacttgatgttggtagtgacatgccaatatatccttcatttcccgag
ggtgatctatttgccttttatgagctctgtaaagcatacaagtggactatagatgatgag
aaggtcttggacttctacaagactgaaggcttaaatagtaaaagtaattggttccaatgg
gacgaggaagagcttggttttatcaaagtcttgcatggaagatctgcaggcaggacaact
gttgcagtcacattctcatgtgattttgtttctacgtcttactcagagaccaggctttat
aatgcatctacatcattattggttgttcctgatcttcctcttgctcttggagttccaata
acatgggttcttcccccgcattacatcacatctagtattttgcctttttctttggaatca
catggccaatgggatggccagagtcgcaaaggcacaattacctattctttgttaagaagt
tgtgaaaaaaatgaagtttggcaaaaggatgcaatttccatagatggggatagaataaaa
acaatggagagcaacaatctcgcatgcatacaggctaaggatcgaaccacaggaaggatt
gagattgcttcttgtgttagggttgcagaggtagcacaaataagaataacaagtcaagag
tttccattccatgtaattcatgttgctattggcactgaacttcatcttcccataagatat
tttgatgctttaggaaatcccttctatgaagcacataatgttcactatcatgcagaaact
aactatcatgatattgtctccatcgatacaaaaaatggcagtggtactctccatctgaag
gcaatgcgacatggtagagctcttttacgagtatctttcaacagtaatccacagaagtct
gactatatgctgatctctgttggtgcccatatatttcctcaaaatgccatcctacatcaa
ggaacttcactcgattttggtgttgaaggcattaatggtcaagtctcaggccgctggctc
agtgccaataaaagtgtcatatctgtagatatgccatcaggaagagctgaaacagttggg
ataggttcaacccaagtattttttgaatctccaaatacgaagttggaaacaacagttaca
gtggtatcagggaatattgtttcagttgatgccccaaaacagatgctaacaaatgttcct
cacccaacaaaaggatataccttccctgtgaagctaagtggcacttacaataagtttgat
gctgttggaaatgctaaagagatatcctatgattgtaaggttgatcctccttttcttggg
tatgcaaagccatgggtggatgcttctagtggtaattcctattgcctcttcttgccacac
tcacccgagcatttggtacgttcaatgccaagattgaaggacatgagaccatatatatct
gtttctatcaatgcttcactgagagaagctagccacgtctctggatctgcatctgcagtt
tttattggaggattttcaatattggagatggacaagagtttaatgcagttgaatctgacg
ccagactccaacaagactatcataactgttttgggtaatacagatgtcgatatccaatgg
caaaaccaggatttgataaagatcagccccatccataaagaagattttgggattggcggt
cgtgctcagtttgaggtgaaaatgcttaaagccaagagattgaaggacaaaatcatcatt
tcacttccagccaacggtcagagagtagaaatagatgttaattatgaacctgaagcagaa
gcggagtcaaaaacgatttttggaggcaccaattttccgatcatagctgtatcttttatc
gcagcgttaggaacaatatttcttgtcaaaaattttgttaggacatctcacagaaatcgg
ccaactcagcagcatacattccctagcactcctgttagggcacctcttacacctgagcgc
agtagtccaattctgaatgaacagtctcctcgaacacctcaaccatttgtagattatgtg
aggaggacaatagacgaaactccatactacaagcgagaagctaggaggagaattaatcca
cagaatacttgctag
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