Jatropha curcas (Barbados nut): 105637085
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Entry
105637085 CDS
T03922
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03082
ATP-dependent chromatin remodeling
jcu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105637085
03083 Polycomb repressive complex
105637085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jcu03036
]
105637085
Enzymes [BR:
jcu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105637085
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
105637085
HDAC complexes
Sin3A-HDAC complex
105637085
BRAF-HDAC complex
105637085
REST complex
105637085
SHIP complex
105637085
MiDAC complex
105637085
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
105637085
Heterochromatin formation proteins
Other heterochromatin formation proteins
105637085
Chromatin remodeling factors
NuRD complex
105637085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
105637085
NCBI-ProteinID:
XP_012075872
UniProt:
A0A067KET5
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MRSKDRIAYFYDGDVGGVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFANELVRYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFFFTDRVMTVSFHKYGDLFFPGTGDVKDIGEREGKFYAINVPLKDGIDDTSFTRLFKT
IISKVVETYLPGVIVLQCGADSLARDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLETELPNEIPDNEYIKYFGPEYSLKIPGGQIENLNSKSYLSTIK
MQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERMDQHTQDKHIQRDDEYYEGD
NDNDHNTDVS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcgaaggacagaattgcctacttttacgacggggatgtgggtggcgtttacttt
ggaccgaaccatccaatgaagccgcaccggctttgtatgacccaccatctcgttctctcc
tacgagctccacaagaagatggagatttatcggcctcacaaggcatatcctgttgagctt
gctcagtttcattcagctgattatgttgaatttttacaccggattacaccagatactcaa
cacttgtttgcaaatgaattggttagatataatcttggagaagattgccctgtctttgag
aacctgtttgagttttgtcaaatttatgctggaggaacaatagatgctgcacgtagatta
aacaatcagctatgtgacattgctataaattgggctggtggattgcatcatgctaagaaa
tgtgaggcatctggattttgttacatcaatgacttagtattgggaattttggagcttctt
aaatatcatgcccgtgttctatatatcgatatagacgtgcatcatggtgatggtgtggaa
gaagcattttttttcaccgacagggtgatgactgtcagctttcacaagtatggggatttg
ttctttcctggaactggagatgttaaggatataggagaaagagaaggaaagttctatgcc
attaatgtcccccttaaggatggaatagatgacaccagcttcacccgactatttaaaaca
attatttccaaggttgttgagacctatcttccaggtgtgatagttcttcaatgtggagca
gattcattagctagggaccgcttgggctgttttaacctctccattgatgggcatgctgaa
tgtgtcaggtttgtgaagaaattcaatctacctttactggttactggaggcggaggatac
acaaaagagaatgttgcgcgatgttggactgttgaaacaggagtacttttagaaacagaa
cttcccaacgagatcccagacaatgagtatatcaaatattttggccctgaatattcattg
aagattcctggtggacaaatagaaaatttaaatagcaagtcttaccttagcacaataaaa
atgcaagtattggaaaatcttcggtgcatccaacatgctccgagtgtacagatgcaagag
gttccgcctgacttctatattcccgattttgatgaagatgagcaaaatcctgatgaacgc
atggatcagcatacccaagataagcatatccagcgggacgatgaatattatgaaggggat
aatgacaatgatcataacacggatgtttcataa
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integrated database retrieval system