KEGG   Jatropha curcas (Barbados nut): 105637085
Entry
105637085         CDS       T03922                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
jcu  Jatropha curcas (Barbados nut)
Pathway
jcu03082  ATP-dependent chromatin remodeling
jcu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:jcu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105637085
   03083 Polycomb repressive complex
    105637085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:jcu03036]
    105637085
Enzymes [BR:jcu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     105637085
Chromosome and associated proteins [BR:jcu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     105637085
   HDAC complexes
    Sin3A-HDAC complex
     105637085
    BRAF-HDAC complex
     105637085
    REST complex
     105637085
    SHIP complex
     105637085
    MiDAC complex
     105637085
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     105637085
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    105637085
  Chromatin remodeling factors
   NuRD complex
    105637085
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 105637085
NCBI-ProteinID: XP_012075872
UniProt: A0A067KET5
LinkDB
Position
Unknown
AA seq 430 aa
MRSKDRIAYFYDGDVGGVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFANELVRYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFFFTDRVMTVSFHKYGDLFFPGTGDVKDIGEREGKFYAINVPLKDGIDDTSFTRLFKT
IISKVVETYLPGVIVLQCGADSLARDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLETELPNEIPDNEYIKYFGPEYSLKIPGGQIENLNSKSYLSTIK
MQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERMDQHTQDKHIQRDDEYYEGD
NDNDHNTDVS
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgatcgaaggacagaattgcctacttttacgacggggatgtgggtggcgtttacttt
ggaccgaaccatccaatgaagccgcaccggctttgtatgacccaccatctcgttctctcc
tacgagctccacaagaagatggagatttatcggcctcacaaggcatatcctgttgagctt
gctcagtttcattcagctgattatgttgaatttttacaccggattacaccagatactcaa
cacttgtttgcaaatgaattggttagatataatcttggagaagattgccctgtctttgag
aacctgtttgagttttgtcaaatttatgctggaggaacaatagatgctgcacgtagatta
aacaatcagctatgtgacattgctataaattgggctggtggattgcatcatgctaagaaa
tgtgaggcatctggattttgttacatcaatgacttagtattgggaattttggagcttctt
aaatatcatgcccgtgttctatatatcgatatagacgtgcatcatggtgatggtgtggaa
gaagcattttttttcaccgacagggtgatgactgtcagctttcacaagtatggggatttg
ttctttcctggaactggagatgttaaggatataggagaaagagaaggaaagttctatgcc
attaatgtcccccttaaggatggaatagatgacaccagcttcacccgactatttaaaaca
attatttccaaggttgttgagacctatcttccaggtgtgatagttcttcaatgtggagca
gattcattagctagggaccgcttgggctgttttaacctctccattgatgggcatgctgaa
tgtgtcaggtttgtgaagaaattcaatctacctttactggttactggaggcggaggatac
acaaaagagaatgttgcgcgatgttggactgttgaaacaggagtacttttagaaacagaa
cttcccaacgagatcccagacaatgagtatatcaaatattttggccctgaatattcattg
aagattcctggtggacaaatagaaaatttaaatagcaagtcttaccttagcacaataaaa
atgcaagtattggaaaatcttcggtgcatccaacatgctccgagtgtacagatgcaagag
gttccgcctgacttctatattcccgattttgatgaagatgagcaaaatcctgatgaacgc
atggatcagcatacccaagataagcatatccagcgggacgatgaatattatgaaggggat
aatgacaatgatcataacacggatgtttcataa

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