Jatropha curcas (Barbados nut): 105644335
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Entry
105644335 CDS
T03922
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105644335
03041 Spliceosome [BR:
jcu03041
]
105644335
03036 Chromosome and associated proteins [BR:
jcu03036
]
105644335
Enzymes [BR:
jcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105644335
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105644335
mRNA cycle factors
Common to processing body (P body) and stress granule
105644335
Spliceosome [BR:
jcu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105644335
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105644335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
105644335
NCBI-ProteinID:
XP_037493732
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MSTRTSWADLAANSAAENTSAGASANNGNIGTTSAVPSRATYVPPHLRNRAPSSDPPAAP
VYSGPASSNDRQGHSGSRWGGPRNDYRSGYGGGGRGGGWGGRSGGWGGRDREVNPFGDDD
DTEQDFSEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNQNIRRCKYVKPT
PVQRHAIPISLSGRDLMACAQTGSGKTAAFCFPIISGIMKMQGQCSQRPLRGARTVYPLA
LILSPTRELSMQIHEEARKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVD
LLERARVSLQMVKYLALDEADRMLDMGFEPQIRKIVEQNDMPRPGARQTMLFSATFPKEI
QRLASDFLFNYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQRANGVQGKQAL
TLVFVETKKGADSLEHWLCINGFPATSIHGDRTQQVFFFIAVGTFLYMGSLYFLPLRFFF
FSVEFVFFFFFFCKVGMSRPCINVGNKNACWNRGTGICGSFKVVNPPQSLFRALMLQHAG
HLIISMFAKLWSNFGYPQIDMIWIMSTVLAGQERSWKTWFLGYALSFNEARPLWRGGNRP
REEAGFGSVIRRFFISQLGANSGYYRWWKHSVDWCSGGYWRVV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagtacacgaacttcatgggctgatttggctgcaaattctgcagctgagaacacatct
gctggtgcttctgctaataatggaaatataggcacaacatcagcagtccctagccgagcc
acttacgtccccccacatcttcgtaaccgtgctccctcttcagacccaccagctgctcca
gtttatagtggtcctgcatcaagtaatgatcgtcagggacacagtggatcccgttgggga
ggtcctcggaatgattatcgatctgggtatggtggtggtggtagaggtggtggttggggt
ggaagaagtggtggttggggtggcagagatcgggaagtgaacccatttggtgatgatgac
gatacagagcaggattttagtgagcaagagaatactggtattaactttgatgcatatgag
gatattccagttgagacaagtggggaaaatgtgcctccacctgtaaacacctttgcagag
atcgacttgggtgaagcattaaaccagaacattcgcaggtgcaagtatgtgaaaccaaca
cctgtgcagcggcatgccatcccaatctctctttcaggcagggatctgatggcatgtgcc
cagactggttctggtaagactgctgctttctgtttcccaattattagtgggattatgaaa
atgcaagggcagtgttcacagagaccactgcgtggggcacgcacagtgtatcctcttgct
ctaattctttctccaaccagggagctttcaatgcagatacatgaggaagccaggaaattc
tcttatcaaacaggtgttaaggttgttgtggcctatggaggagcaccaattaatcaacag
ttgcgggaactggagagaggtgttgatattcttgtggcaactccaggaagactggtagat
ttgctggagagagctagagtttcattacagatggtcaagtatttggccctagatgaggca
gataggatgctggatatgggttttgagccacaaataagaaaaattgtggaacaaaatgac
atgcctcgaccaggtgctagacagacaatgcttttcagtgctacctttccaaaagagata
cagaggctagcttctgattttttgtttaattatatctttttggctgtcggacgagtgggc
tcaagtacagatttgattgttcaaagagttgaatttgttcacgagtctgacaaaagaagt
cacctcatggaccttcttcatgcacagagggcaaacggtgtccaaggcaagcaagcttta
actttagtttttgtggagacaaagaagggtgctgattcgcttgaacattggttgtgcatt
aatgggttccctgccaccagcatacatggtgatagaacacaacaggtatttttcttcata
gcagttggaacatttttatacatgggatcactatattttctgcctctgagattttttttt
ttttccgttgaatttgtttttttttttttttttttttgtaaagtgggcatgtcccgtccc
tgtattaatgtgggaaataaaaatgcatgttggaacaggggaacaggcatttgcggatca
tttaaagtggttaacccaccccaatctttgtttagggcactgatgttgcagcacgctgga
catttgattatttctatgttcgcaaaattgtggtccaactttggatatccccaaattgat
atgatatggattatgtccaccgtattggcggggcaggaacggagttggaaaacttggttt
cttggctatgccctttctttcaatgaggcccgtcctctatggagaggaggaaatcgtcct
cgggaggaggcaggttttgggtccgtgattcgaagattcttcatttcacagttaggggca
aactcgggttattataggtggtggaaacacagcgtggattggtgttctggtggatattgg
agggttgtttaa
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