Jonesia denitrificans: Jden_2550
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Entry
Jden_2550 CDS
T00972
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
jde
Jonesia denitrificans
Pathway
jde00470
D-Amino acid metabolism
jde00550
Peptidoglycan biosynthesis
jde01100
Metabolic pathways
jde01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Jden_2550
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Jden_2550
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Jden_2550
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
jde01011
]
Jden_2550
Enzymes [BR:
jde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Jden_2550
Peptidoglycan biosynthesis and degradation proteins [BR:
jde01011
]
Precursor biosynthesis
Amino acid ligase
Jden_2550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATPgrasp_YheCD
ATP-grasp
RimK
TTL
GARS_A
ATPgrasp_ST
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
ACV10182
UniProt:
C7R3N7
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All DBs
Position
2742648..2743607
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AA seq
319 aa
AA seq
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MSSHPFVVILAGGLSHERDVSLRSGRRVAEALRSTGMTVSVVDVDAQLLPRLQSHRPDLV
WPLLHGASGEDGSIRDVLELLDLPYLGTRPRESRVAWNKPVAKAVLAAAGVLTPSYVTLP
QSLFRELGARSVMEPVTAKLGLPLVVKPAQGGSALGVTLVTSAEQLPQALVDCFAYGDLA
LIEEAITGTEVSVSVVESPDVTALPAVEIITDGPYDYDARYNPGRTQYFTPARLDPEIAD
AAARVALTAHTTLGLRHVSRSDLIIDGKGQVWFLEVNVAPGMTETSLLPQAVVASGQSLP
DAYSSWVRAALVVADSAAQ
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcacccttttgttgtcattcttgctggcgggctttcccatgaacgtgacgtg
tctctacgctcgggacgccgggttgctgaggcgttacgcagcaccggtatgactgtttct
gttgttgatgtggacgcccagttgcttcctcgtcttcagtctcatcgtcccgatttggtg
tggccgttgctccatggggctagtggtgaggacgggtcaatccgtgacgttcttgagctt
ctcgatttgccgtatttgggcactcgcccacgggagtcacgtgttgcctggaataaacca
gtggcaaaggccgtcttggctgctgctggtgtcctcacgccctcgtacgtgactttgcct
cagagtttgtttcgtgaacttggtgcacgctctgtcatggagccggtcactgccaagctt
ggactaccgttggtggtgaagcctgctcaaggtggctccgcgttgggtgtcaccttggtg
acgtctgcggagcagcttccgcaagcactggttgattgttttgcgtacggcgatcttgct
ctcattgaagaggcaattacaggtactgaggtgtcggtgtcggtcgtcgagtcgccggat
gtgacggcgctccccgccgtggaaatcatcactgacggtccttatgattacgatgctcgg
tataacccaggtcgcacccagtattttacgcctgctcgtttggacccagaaattgccgat
gcggccgcccgtgttgcgttgaccgcacacacgacgttggggttacggcatgtgtcacgc
tcggacctcattattgatggtaagggtcaggtctggttccttgaggtgaatgtggcgccg
gggatgacggagacgtcgcttcttcctcaagctgttgttgcttctggacagtctcttcct
gacgcttactcgtcgtgggttcgtgctgcgttggttgttgctgattcggcggcgcagtag
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