Juglans regia (English walnut): 108998413
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Entry
108998413 CDS
T05245
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
108998413
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
108998413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Zn_Ribbon
TFIIB
Trm112p
GATA
Motif
Other DBs
NCBI-GeneID:
108998413
NCBI-ProteinID:
XP_018830509
UniProt:
A0A2I4FFT1
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All DBs
Position
4:complement(29374161..29376320)
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AA seq
545 aa
AA seq
DB search
MSSGCTSCRSKSLVRDDITGSLVCSACGLVQEFDNFDAQLGGLNGPQGTFVRVGTAGTGT
LKNYKETKVYAAQTLIENITFSIGLSSSKSNDVKTMIATITENEFGQGDWFPILIGACAY
VVMRKDNKLLPIAEVASIIGCDIFELGRMVSRVVDFLDLKGPEEFPEFDIVASFERTVRN
SPRFTGVGRDKVATMLKQGIFLIQCAVKWFLTTGRRPLPVVAAVLVLVAELNGVDVRIDD
VAKEVHATVSTCRLRYRELLESLVKVAQVLPWGKDVTLKNVVKNAPFVIQYMERKSMEKP
VETRKTKGVEGVGVDLRDVVSQCLRKDVEYGTDLRSVENDSQYFEVEKNSGYARSRDDDL
ERMNISHECLSLMYTEFLNETSHTKSIEGDVEVRTKKTRRGFEPRPCRDWWNGKSELTKK
LLLKQILEKDVGLDALPPSFVSGCRAYKRRKKRIDAAKWRVNRVLHPSRTDLVDSGDIYS
SEDVDDGKRRKRRRIYDIDWEDFIIETLLLHGVNEEEIEKGHYNTLLDLHVFNGGIVPQI
PSRKE
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcggctgcaccagttgccgcagcaagtccctcgtccgcgacgacatcacgggg
agcctggtatgttccgcttgcggcctcgtccaggagttcgacaacttcgatgcccagctc
ggtggcctcaatggcccccaaggcaccttcgttcgcgtcggcaccgcaggtacgggcacc
cttaaaaattacaaggaaacgaaagtctacgcggcccaaaccctaatcgaaaacatcacg
tttagcataggtttgtctagttccaaatccaacgacgtcaaaacaatgattgccacgatc
actgagaacgaattcggccaaggcgattggttccctattctaatcggcgcttgcgcctat
gtcgtgatgcggaaagataacaaattgttaccgattgccgaggtggcgtcgattattggt
tgtgatatttttgaattaggtagaatggtttcgcgtgtggtcgatttcttggacctgaaa
gggcccgaggagtttccggaattcgacatcgtggcctctttcgagcggacagtgaggaat
agcccgaggtttacgggagtggggagggataaggtggcaacaatgctcaagcaggggata
tttctcattcagtgtgctgtgaagtggttcttaacgacagggcggaggccgcttccagtg
gtggctgcagtgctggttctcgtggcagagttgaatggggtggatgtgcggattgatgat
gtggccaaggaggttcacgccacggtttcaacgtgtaggttgaggtatagggaacttttg
gagtcactagtgaaggtggcccaagtgttgccttgggggaaggatgtcacgctcaagaac
gtggttaagaatgcaccttttgtgattcaatacatggagaggaaatcaatggagaagcct
gttgagacgaggaagacaaagggagtagaaggtgttggtgttgatttgagagatgtggtt
agccaatgtttaaggaaagatgtcgaatatgggactgatctgagaagtgtggagaatgac
tctcagtattttgaagttgaaaagaatagtggatatgctagatccagggatgatgattta
gagaggatgaatatttcgcatgaatgtttgtccctgatgtacacggagtttttaaatgag
acgagtcatacaaagtccattgaaggggatgttgaggttcggacaaagaaaacgaggaga
gggtttgagcctcgtccgtgtagggattggtggaatggaaaatcagagctgaccaaaaag
cttttactcaagcaaatattggagaaagatgtaggtttggatgctcttcccccatccttt
gttagtggttgcagggcttataagaggaggaaaaaaagaattgatgctgctaaatggaga
gttaatagagttttgcatccatcaagaactgatttagttgacagcggtgatatatactct
tcggaagatgtagatgatgggaagaggagaaagcgaagaagaatatatgatattgattgg
gaagattttattattgaaactctccttctgcatggagtgaatgaggaggaaattgagaag
gggcattacaataccttgcttgacctacatgtttttaacggtggaattgtgccacagatt
ccatcaaggaaggaatag
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