Juglans regia (English walnut): 109001987
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Entry
109001987 CDS
T05245
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
jre
Juglans regia (English walnut)
Pathway
jre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109001987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
109001987
03036 Chromosome and associated proteins [BR:
jre03036
]
109001987
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109001987
Coactivators
SAGA/TFTC/STAGA complex
109001987
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109001987
STAGA complex
109001987
TFTC complex
109001987
SAGA complex
109001987
SLIK complex
109001987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
109001987
NCBI-ProteinID:
XP_018835071
UniProt:
A0A2I4FTU7
LinkDB
All DBs
Position
7:complement(43365784..43376132)
Genome browser
AA seq
654 aa
AA seq
DB search
MAESAAAAASSPKPLQPAIPIDPTTATPPALTTIATQAPTPTPTNSGIAQNPSNSSSNPP
PIPSPSPLSHSHSPSLDHISSPPQIPLPQPQPQPQQHQQLTPAVGLDYQQPKLQQQQQQQ
QQQQFQQQQSQQQQSLTQNVTAMSNYQIQQSMQRSSSMSRLNQIQQLGVMRQQQQQQQQQ
QQQQQQQGIYGNVNFGGSGGIQQQNQQPMGTGGNLSRSALIGQSGHLPMLSGAAAAMAAA
QFNLQSQLLASPRQKAGLVQGTQFHQGNPAGQALQGMQAMGMMGPLNLSSQIRASGAPSY
AQRINQGQMRQQLQQQSSLNSAQIQSLPRTASLAFMSSQLSGLSQNGQPAMIQNSLSQQQ
WLKSMPPISGTGSASLRLQHQRQQVLIQQQLQQNSMALNQQQLSQLVQQQQPMGHSQLHQ
QQQQQQQQQQQQQLQPPVQQQLQQLPLHQQQQYSPRVPGPTGQKSLSLTGSQPDATASGT
TTPGGSSSQGTEATNQLLGKRKIQDLVSQVDSQGKLDPEVQDLLLEIADDFIDSVTTFAC
SLAKHRKSSTLESKDLLLHLEKNWHLNVPGYSSEERKYQSKPLSTDLHKKRLDVIRTLME
SPHPETNTSNAKEMIRQGLTNPVGANYLVRPSISPEQLVSQSTGPQMLQQMTRF
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagtgcggccgcagcagcatcgtctccaaaacccctccaacccgcaatcccc
atcgacccaacaacagcgacaccaccagcactaacgacaatagcaacacaagcgcctacg
cccacgcccacaaattccggaattgctcaaaatccatcaaattcttcatcgaatccacca
ccaatcccttcaccttctcccctttcacactcccactccccttcccttgaccatatctcc
tcccctccacaaatccctctcccccaaccacaaccacaaccgcaacaacatcagcagctc
accccagccgttggattagattaccaacaaccgaagctgcaacaacagcagcagcagcag
cagcagcaacaattccaacagcagcaatctcagcaacagcagagtttgacccagaatgtc
accgccatgtcgaattatcaaatccagcaaagcatgcaacgctcatcgtccatgtcgcgg
ttgaatcaaattcaacagttgggggttatgaggcagcagcagcagcagcagcaacaacag
caacagcaacagcaacagcaggggatttatgggaatgtgaattttggtgggtctggtggg
attcagcagcaaaatcagcagccaatgggtactggtgggaacttatcccgttcagcgctg
atcgggcagagcggtcacctgcccatgttgtcaggcgcagccgccgccatggctgctgcg
cagttcaatctgcaatcccagttgctagcatcgccaaggcagaaagctggactggtccaa
gggactcaatttcatcaaggtaacccagctggtcaagctttacaaggaatgcaagcaatg
gggatgatgggcccacttaatttgagctcgcaaataagagcgagtggggcccccagttat
gcccagcgaattaaccagggtcagatgaggcaacagttgcagcagcaaagttctctcaac
tctgcacagattcaaagcttacccaggacggcatcgctggcatttatgagctctcagtta
tctggtttgtctcagaatggacagccagccatgatacaaaactctttatcacagcaacag
tggttgaagtcaatgccaccaatctctggcactggttcagcttcactccgtcttcaacat
cagaggcagcaggtcctcattcagcagcagttgcagcaaaactcgatggccttgaatcaa
cagcaactatcccagctggtacagcagcagcaaccaatggggcattcgcagctacatcag
cagcagcagcagcagcagcagcagcaacaacaacagcaactacaaccacctgtacaacaa
caattgcaacaactgcctttgcatcagcagcagcagtattctcccagggtgcctggaccc
acaggccagaaatcacttagtttgacaggatcacaaccagatgctactgcatctggtaca
acaacaccaggggggagttccagccaaggaacagaagcgaccaatcaacttcttgggaaa
agaaaaatacaggatttggtttcacaggtggattcacagggaaagctggatcctgaagtt
caagatcttcttttagagattgctgatgacttcattgattctgtgactacattcgcgtgc
agtttggcaaaacatcggaaatcatcaactttagagtccaaggatttattactacaccta
gagaagaattggcatttgaacgtaccaggatattcaagtgaagagcggaagtaccaaagc
aaacctctgtcaactgatctccacaagaagcgtcttgatgttattcgcacattaatggaa
tccccgcaccctgaaacaaatacaagtaatgctaaagagatgataagacagggactgact
aatccagttggtgccaactacttggtacgaccttccattagtccagagcagttggtttcc
caatctactggtccccaaatgctacagcagatgacacggttttaa
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