Juglans regia (English walnut): 109005365
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Entry
109005365 CDS
T05245
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109005365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
109005365
Enzymes [BR:
jre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109005365
Spliceosome [BR:
jre03041
]
Complex A
U2 snRNP components
U2 related factors
109005365
Complex B
109005365
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
FeoA
Motif
Other DBs
NCBI-GeneID:
109005365
NCBI-ProteinID:
XP_018839829
UniProt:
A0A2I4G7G1
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All DBs
Position
8:8366955..8372674
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AA seq
1152 aa
AA seq
DB search
MDEGKHKSRREDSERSEEDLKRSHRDRDRERVKERNGDKHKEKRNRESRRSERERSSDSD
GKYDREWEREKHRTRSRDDEKERVREKKREREREDREREREREKEREKEKRERAREKEKE
REREREREKRERDREEREREREREKERERREREREREKERRMRDREKRRAADSDHSNDED
EHRERDRKRHRSDDGDHRERDRERSSSRPRKHRDDSEEIPRRKSGDDDSEKIQKKATREE
ELEDEQKRLDEEMEKRRRRVQEWQELRRVKEEAEREKRGEADADEPMSGKTWTLEGESDD
EESLGKLETDMDVVEDATPTTEQAGDSVLVDSHNGSVTSTSQEVVDVSAEDDEIDPLDAF
MNSMVLPEVEKLKDGLAPSNANDKIVDLNNKDKKHEGSNVLQPLKASNKSMGRIMQGEDS
ESDYGDPDNEDTLEDEDDDEFMKRVKKTKAEKLSIVDHSKIDYQPFRKNFYIEVKEISKM
TSEDVAAYRKQLELKIHGKDVPKPVKTWHQTGLTGKILETIKKLNYEKPMPIQAQALPII
MSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELVQQIHSDIK
KFTKVLGIGCVPVYGGSGVAQQISDLKRGTDIVVCTPGRMIDILCTSGGKITNLRRVTYL
VMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEVLARKVLNKPVEIQVGGR
SVVNKDISQLVEVRPENERFFRLLEILGEWYEKGKILIFVHSQEKCDALFKDLLRHGYPC
LSLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHR
VGRTGRAGRKGCAITFISEDDARYAPDLVKALELSEQAVPDDLKALSDSFMAKVNQGLEQ
AHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKTDSEDEDEGIRKAGGDISQQAA
LAQIIAAASKVSTPSMPTPVSAAQLLPNGGLPVTLPGVMGLTIPGTTAVVTGTGLPVVAN
DAAGAARAAAIAAALNLQQNLAKIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPIS
EWTGAAITTRGQYFPSGKVAGPGERKLYLFIEGPTEQSVKRAKSELKRVLEDITNQALQL
PGGAQPGRYQVL
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggggaaacataagtctaggagggaggattcggagaggagcgaggaggatttg
aagcggagccaccgggaccgggatagagaaagggttaaggagaggaacggggataagcac
aaggagaagaggaaccgtgaaagtcggcgatccgagagagagaggagtagtgattctgat
ggaaagtatgatagggagtgggagagggagaagcatagaacgcggagtcgggatgatgag
aaggaaagagtgagagagaagaagagggaaagagagagggaagacagagagagggagagg
gagagggagaaagagagagagaaagagaagagggagagggcgagggagaaagaaaaggag
agggaaagggaaagggaacgagagaagagagaacgtgatagagaggagagggagagggag
agggaaagagagaaggaaagggaaaggagggagcgtgaaagagagagagagaaggagagg
agaatgcgtgacagggagaagcggcgagcagctgatagtgatcacagcaatgacgaggat
gagcacagggagcgtgataggaagcggcataggagtgatgacggtgatcacagggagaga
gatcgtgaacggagtagcagcaggcctcgcaaacacagggacgatagtgaagagatccca
aggagaaagagcggtgatgatgactcggagaagatacagaagaaagcgacacgtgaagag
gagttagaggacgagcagaagagattggatgaggaaatggagaagcgaaggaggagagtg
caggagtggcaagagttgaggagagtgaaggaagaagctgagagagaaaaacgtggggaa
gcggatgctgatgaacctatgtctggcaagacctggactcttgaaggggaatctgacgat
gaagaatcactgggaaaattggagacggacatggatgttgttgaagatgccacgcctaca
accgaacaagctggtgattcagtgttggttgattctcacaatggaagcgtgacatccact
tcacaggaggtggttgatgtttctgccgaggatgatgaaatcgatccattggatgccttc
atgaattctatggtattgcctgaggttgagaagctaaaagatggtttggctccttcaaat
gctaatgataagattgttgacttgaataacaaagataagaagcatgaaggaagtaacgtt
ctacagccactgaaggcttcaaataaatctatgggtcgaataatgcagggcgaagattcc
gagtcagattatggtgaccctgataatgaggatactttggaagatgaagacgatgatgag
ttcatgaaaagggtgaagaagacaaaagcggagaagctttcaatagttgaccactcgaag
attgattatcaaccattccggaaaaatttctacattgaagtgaaagagatatcaaagatg
acttctgaagacgttgcagcttaccggaaacaattggaattgaagatacacggtaaggat
gtgccaaagccggtcaaaacatggcaccaaactggacttacaggtaaaatcttggagaca
ataaagaagcttaactatgaaaagccaatgccaattcaagctcaggctctgcctataatt
atgagtggtcgagactgcattggcgttgccaaaactggctcgggcaaaacccttgccttt
gtgctgccaatgttgaggcatatcaaggaccagccgcctgtggtagctggagatggacct
attgggctaataatggcccctacaagggagcttgtacagcagatccacagtgatataaag
aagtttacaaaagtgcttggcatcgggtgtgtccctgtatatggaggttctggtgttgct
caacaaattagtgatttaaaacggggcactgatatcgttgtatgtactccaggtaggatg
attgacatactttgcaccagtggggggaaaatcacaaatctgcgtagagtcacttatttg
gtcatggatgaagctgatcgaatgtttgacatgggttttgaaccccaaattactcgaatt
gtgcaaaatattcggccggatcgccaaacagtactcttctctgccacattcccccgccaa
gttgaagtattggcgcggaaagtgttaaacaagcctgtagagatacaagttggtggtaga
agtgttgtgaacaaggacatatcacagttggttgaggtgaggccggaaaatgagaggttc
tttagattgttggaaatacttggtgaatggtatgagaaaggaaaaattttgatttttgtc
cactcacaggagaagtgtgatgctttgttcaaggatctcctcaggcatggttatccttgc
ctctcactgcatggggctaaggatcagacagatagagaatccaccatttctgactttaaa
agcaacgtttgcaatttgttgattgcaacaagtattgctgccagggggttggacgtgaag
gagcttgaattggtgatcaactttgacgttccaaaccactatgaagactatgtccaccgt
gttggtcgtacaggtcgagctggtcggaaaggctgtgctatcacatttatctccgaggac
gatgcaagatatgcaccagatcttgtaaaggcattggaactctctgagcaagctgttcct
gatgacctgaaagctctttctgatagttttatggcaaaagtaaatcagggacttgagcaa
gcccatgggactggttatggtggaagtggttttaaatttaatgaagaggaagatgaagtg
aggagagcagcaaagaaagcacaggccaaagaatatggttttgaggaggacaagacagac
tcagaagatgaagatgaaggtataaggaaggcaggtggtgacatatcgcagcaggctgcc
ttagctcagataatcgctgctgcctccaaagtcagcacaccttctatgccaacgcctgtc
tctgctgcccaactgcttcccaatggtggactgcctgttacactgccaggcgtaatgggt
ctaacaattcctggaacaacagcagttgtgactgggactggcctgcctgttgttgccaat
gacgctgcgggggcagctcgagcagcagccattgctgctgctctcaacttgcagcaaaat
ttggcaaaaattcaagctgatgctatgccggaacactatgaggcagaattggagataaac
gattttccccagaatgcccgatggaaggttacccacaaggaaactttgggccctatttca
gagtggactggagccgctattactaccagggggcagtatttcccgtcaggtaaggtagca
ggaccaggagaacgtaagctttacttgttcattgagggccctactgaacagtctgtgaag
agagctaaatcagaattaaaacgcgttttggaagacatcactaaccaggcattacaacta
cctggtggagctcaacctggcagataccaagttctgtaa
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integrated database retrieval system
