Juglans regia (English walnut): 109005902
Help
Entry
109005902 CDS
T05245
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 33A-like isoform X1
KO
K27472
mediator of RNA polymerase II transcription subunit 33
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
109005902
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
109005902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
109005902
NCBI-ProteinID:
XP_018840536
UniProt:
A0A2I4G9G3
LinkDB
All DBs
Position
12:21727211..21739270
Genome browser
AA seq
1324 aa
AA seq
DB search
MAVSVHTGIWDSVRELTRVAQRKGSDPLHWALQVSSNLNSAGVALPSAELADVLVSYICW
DNNLPILWKFLEKALVLKIVPPMFVLALLSTRVIPHRKSWPVAYRLYLELLKRHAFALKF
QINDLNYQKVMESIDDVLLLSQRFGMTPSEPGILVVQFIFSIVWQLLDATLDDEGLLELT
SDEKSIWATKSQDMQIDYHDIYDEKRAELQERLQNENTVMSVDLIGQFLQNKVISRIIFL
ARRNMPTHWVHFIQRLRLLETNSSALRNSNALTPEALHQLTSDAPTVLSREYKTTSLQKF
HAVMAFGSLSSSAGPCQGANRSALWLPLDLLLEDVMDGCLVNATSAIEIISGLIKTLQAI
NGTSWHDTFLALWIASLRLVQRERDPIEGPVPRLDTRLCILLSITTLVVADLIEEESAPV
DETECGSTNHWKDKKVTGKCHNDLVSSLQILRDYQGLLTPPQSVVSAANQAAAKAMLFAS
GINVGSAYFECIGLKDMPINCSGNMRHLIVEACIARNLLDTSAYLWPGYVNGQINQIPHS
VPAQAPSWSSFMKGAPLTPLLINALVSTPASSLAELEKIFDIAVKGTDDEKISAATILCG
ASLIRGWNIQEHTIHFIARLLSPPAPPKYCGNGSHLIGYAPMLNVLIVGIASIDCIQIFS
LHGLVPQLACSLMPICEVFGSCVPDVPWVLTNGEEVSAHAVFSNAFILLLKLWRFNHPPL
EHGVGETPTVGSQLTPEYLLLLRNSHLVSSGNVNKSRNRRRLSAVASLLSPQPVFVDSFP
KLKAWHRQHQACIASTLSGLVHGTPVHKIVDGLLNMMFKKINRGGQSLTVTSGSSSSSGP
GNEDTSLRPKLPSWDILEAVPFVVDAALTACAHGKLSPRELATGLKDLADFLPASLATIV
SYFSAEVTRGVWKPAFMNGTDWPSPAANLFNVEEQIKKILATTGVDIPSLSAGGSSPSTL
PLPLAAFVSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVASLWTQKAKRWSDF
LVFSASQTVFLHNSDAVVQLLKSCFAATLGLNDIPISSSGGVGALLGHGFGSHFCGGISP
VAPGILYLRVYRSIRDIVFITEEVVSLLMHSVRDIVSSGLPRERLENLRTSKIGMRYRQV
SLAASMTRVKVAAALGASLVWLSGGLSLVQSLIKETLPSWFISVHRSELEEGSEGMVAML
AGYALAYFAVLCGAFAWGVDSTSSASKRRPKILGTHLEFLASAVDGKISLGCDWATWRAY
VSGFVTLMVGCTPNWALEVDADVLKRLSNGLRLWNEEELALALLGIGGVGTMGAAAELII
ENDM
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccgtacatactggtatctgggacagcgtgagagagctaaccagagtggcc
cagagaaagggtagcgatcctctgcactgggcgttacaggtatcttcgaacttaaactcc
gctggagtggctctgccgtctgcggagctcgccgacgtgttggtatcgtacatttgctgg
gacaacaaccttcctattctctggaagtttctggagaaggcgttggtgctgaagatcgtg
ccgcctatgttcgtacttgccctgctctccacgagggtcattccgcaccgaaaatcttgg
ccggtggcatataggctttatcttgaactccttaagagacacgccttcgcccttaaattt
cagataaatgatctgaattatcagaaggtcatggaatcaatagatgatgttcttcttctt
tcacagagatttggcatgaccccaagtgaacctgggattcttgtggttcagtttattttt
tcaattgtgtggcagctgcttgatgcaacattagatgatgaagggttgctagaacttaca
tcagatgagaagtccatatgggcaactaaatcacaagacatgcaaatagattaccatgat
atttacgatgagaagagggctgaacttcaggagagactacagaatgaaaatactgtgatg
tctgtcgatttaatagggcaatttctgcaaaataaagtaatttcgagaattattttcttg
gctcgtcggaacatgcctacccattgggttcatttcatccagcgattacggttacttgaa
acaaattcatcagcactaagaaattcaaatgctctaactcctgaggctcttcatcagttg
acttcagatgctccaacagtcttgtctcgggaatacaaaacaacttcactacaaaagttc
catgctgttatggcttttggttctctatcttcatcagctggtccatgccaaggggctaac
cgttctgctctttggcttcctcttgatcttttattggaagatgtcatggacggatgtcta
gttaatgcaacaagtgctattgaaataattagtggtttgattaaaacccttcaagcaata
aatggcacgtcctggcatgatacttttttagctctttggatagcatctcttcgtcttgtt
cagagggaaagggatcccattgagggccctgtgcctcgccttgatactcgattatgcatt
ctgttgtctatcacaacacttgtggttgctgatctaattgaggaggaaagtgcaccagtt
gatgaaacagaatgcggctctactaatcattggaaagacaaaaaggttacagggaagtgc
cacaatgatttggtctctagcctacagatacttagggattatcagggcttgctgactcca
ccccaatctgttgtttctgcagccaatcaggctgctgcaaaggcaatgctttttgcttca
ggcatcaatgtggggagtgcatacttcgagtgcattgggttaaaagatatgcctatcaac
tgttctggaaacatgcgccatttgatagttgaggcttgtattgccagaaatctactagac
acatctgcatatctctggccaggatatgtgaatggacaaatcaatcaaatacctcatagt
gtgcctgctcaagcacctagttggtcatcatttatgaagggcgctccactcactcccttg
ttgataaatgccttggtttcaactcctgcttcaagcttggcagagctcgagaaaatattt
gacattgcagtcaaaggaacagatgatgagaagatatctgctgctacaatactttgtggg
gcctccttaattcggggttggaatatacaggaacacaccattcatttcattgctagattg
ttgtctcccccagctcctccaaaatattgtgggaatggcagccatttgatcggttacgct
ccaatgctgaatgtactaattgttggaatagcatctattgattgtattcagattttctct
ctacatggcttggttccgcaacttgcatgttcactgatgccaatctgtgaggtgtttggt
tcatgtgtgcctgacgtcccatgggttcttacaaatggggaagaagtttctgctcatgct
gtgttttcaaatgcatttattcttcttttgaagctttggaggttcaatcatcctcctctt
gaacatggagtaggagagacacccacagttggatcccaactaactcctgaatacctccta
ttattacgaaactcacacctagtatcttctggaaatgtcaataagagtcgaaacaggaga
agactctcagcagttgcaagtttgttatctccacaacctgtatttgtggactcatttcca
aaattaaaagcgtggcatcggcagcatcaagcatgtatagcttcaaccctctctggtctt
gttcatggaaccccagttcataagattgttgatgggcttcttaatatgatgttcaagaag
attaatagaggaggccaatccttaactgttacatcaggaagtagtagttcttctggacct
ggaaatgaagatacctctttaagacctaaattgccttcctgggatattctggaagctgtt
ccctttgtggttgatgccgctttaactgcctgtgctcatggaaaactttctcctcgtgaa
ctggccacaggtcttaaagatttagctgattttcttcctgcatctttggcaaccattgtg
agctacttctctgctgaagtaactagaggtgtttggaaaccagcttttatgaatggaaca
gattggcccagtcctgctgcaaatctttttaatgttgaggaacagattaaaaaaatcttg
gctactaccggtgttgatatcccaagtctttccgcaggtggcagttctccatctacactt
ccactgcctctggctgcctttgtaagccttactataacttacaaaattgacagagcgtca
gaacgttttctaaatctggctggcccagccttggagtcccttgcagcaggttgtccatgg
ccttgcatgccaatcgtggcttctctgtggacacaaaaagcaaagcgctggagtgacttc
cttgtcttttctgcctctcaaactgtcttcctccataacagtgatgcagtggttcagcta
cttaaaagctgcttcgctgcaacactcggtctgaatgatattcccatctcaagcagcggt
ggggttggagcacttcttggccatggatttggatcccatttctgtggtgggatttctcca
gttgcccctggtatcctttatctacgagtttatcgatccattagagatattgtgttcata
acagaagaagttgtttctctcttgatgcattctgtcagagatattgtatccagtgggctt
cctagagagagattagagaatttgaggacaagcaagattggaatgcgatacagacaagtt
tcacttgctgcatcaatgactcgggtgaaagtggcagctgcccttggggcttctttagta
tggttatctggcggcttaagtctagttcaatctttaataaaagaaacgttgccatcttgg
tttatatctgttcacagatctgagctggaagaaggatcagaagggatggtcgcaatgctt
gcgggatatgctctagcttactttgccgtgctttgtggagcttttgcttggggtgttgac
tcaacatcatctgcatcaaaacgccggccaaaaatccttgggacccatttggaatttctg
gctagtgcagttgatgggaaaatatcacttggttgtgattgggctacgtggcgtgcttat
gtctcaggatttgtgaccttaatggtgggttgcactccaaattgggcactggaggtagat
gcagatgtgttgaagagactaagtaatgggctgaggctgtggaatgaggaggagcttgct
ttggctttgctggggattggtggggttggtacaatgggcgcggctgctgaactgataata
gaaaatgatatgtaa
DBGET
integrated database retrieval system
