Jatrophihabitans telluris: M6D93_01030
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Entry
M6D93_01030 CDS
T08151
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
jtl
Jatrophihabitans telluris
Pathway
jtl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jtl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M6D93_01030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jtl03400
]
M6D93_01030
Enzymes [BR:
jtl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
M6D93_01030
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
M6D93_01030
DNA repair and recombination proteins [BR:
jtl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M6D93_01030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-TFIIB
NFACT_N
DUF294_C
Ribosomal_S13
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
UQX88599
LinkDB
All DBs
Position
complement(221424..222299)
Genome browser
AA seq
291 aa
AA seq
DB search
MPELPEVEALAAFLRDNAAGRVVVRADVAAFSAVKTFDPPLNAINGLTVTGAGRYGKFLD
LEIDGLHLVTHLSRAGWLHWRESLPPIPPKPGRGPIALRLHLAPADLGDGPAGGFDLTEA
GTQKRLAVYLVRDPLEVPGIARLGPDALAVSLEDFAVLLKGERAQIKGVLTSQSILAGIG
NAYSDEILHAAKLSPFAIAARLSEDQTSSLYDAMRSVLTTAVERSVGQKAATLKSEKRSG
LAVHARTGLPCPVCGDTVREVSFADKSLQYCPTCQTGGKSLADRRLSRLVK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttgcccgaggtcgaggcgctggccgccttcctgcgagacaacgcggcaggt
cgcgtcgtcgtccgtgccgatgtcgccgcgttcagcgccgtcaagaccttcgatccgccg
ctcaacgcgatcaacggcctgaccgtcaccggtgccggtcgctacggcaagtttctcgat
ctggagatcgacggcctgcatctggtaacccatctgtcccgggccgggtggctgcactgg
cgcgagtcgctgccaccgatccccccgaagcccggccgcggtccgatcgcgctgcgcctg
cacctcgcgccggccgatctcggcgacggcccggccggtggcttcgacctcacggaggcg
ggcactcagaaacggctggccgtctacctggttcgcgaccccctggaagtgccgggaatc
gcccggctgggcccggacgcgctggccgtctccctggaggacttcgccgtcctgctcaag
ggcgaacgcgcacagatcaagggcgtactcaccagccagtcgatcctggccggcatcggc
aacgcctactccgacgagatcctgcacgcggccaagttatcgccgttcgccatcgccgcg
cggctgagcgaggaccagaccagcagcctttacgacgcgatgcggtcggtcttgaccacg
gccgtcgaacggtctgtgggccagaaggccgccaccctgaaatcggagaagcgcagtggc
ctggcggtgcacgcccgcaccggtctgccgtgccccgtgtgcggtgacacggttcgcgag
gtgtccttcgccgacaagtccctgcagtactgcccgacctgccagaccggcggcaagagc
ctggccgaccgccgcctgtcgcggctggtgaaatag
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