Kazachstania africana: KAFR_0H02850
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Entry
KAFR_0H02850 CDS
T02487
Symbol
KAFR0H02850
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
kaf
Kazachstania africana
Pathway
kaf03022
Basal transcription factors
kaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KAFR_0H02850 (KAFR0H02850)
09124 Replication and repair
03420 Nucleotide excision repair
KAFR_0H02850 (KAFR0H02850)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kaf03021
]
KAFR_0H02850 (KAFR0H02850)
03400 DNA repair and recombination proteins [BR:
kaf03400
]
KAFR_0H02850 (KAFR0H02850)
Transcription machinery [BR:
kaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KAFR_0H02850 (KAFR0H02850)
DNA repair and recombination proteins [BR:
kaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KAFR_0H02850 (KAFR0H02850)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
bPH_7
Motif
Other DBs
NCBI-GeneID:
13887690
NCBI-ProteinID:
XP_003958829
UniProt:
H2AZD8
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All DBs
Position
8:541895..543439
Genome browser
AA seq
514 aa
AA seq
DB search
MSSDLLRHTVNQYLEELPQQVQTRLYESPATCLAIYRLLPQLSKFFVMAMVFNENDVSLR
DLDRWVKTNGKLQFQEAIKSMKSLHLIIPSKGNGTLMISLNPTFKESFRNALTGGEINNS
FGIVVDNEAEQSRITLNFLDEYSANKWETILHFMVGTPLANIPSHNVLNLLKNSRLMEEA
DKTGTLKITNEGFQFLLQEINSQIWTLLLQYLKMSESLQMDPVEVLNFIFMLGALEIGKA
YSIDGLTETQKTMLRDFRDYGIIFQKNLTSKSFYPTNLAIMLTSDTRSILRTASGAMDSV
LRQNKEDSKKQTSGDNVTEDTANDIEQIGLENQEGRDGSLIIETNFKLYSYSNSPLQIAI
LSLFVHLKSRFVNMVTGQITRESIRRALVNGITADQIIAYLETHAHPRMRRLAEEKLEKK
LELDPNSKDTLQILPPTVVDQIKLWQLELDRVITYDGSLYSDFENSTEYNMLSKYAQDIG
VLIWKDDKKRKFFVSKEGNTQVLDYAKRKLKKKA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgaccttctgaggcacaccgtcaaccagtatttggaagaacttccgcagcag
gtgcaaacaagactgtatgagtctcctgcaacatgtttagcaatttatagattgttacca
caattatcaaaattcttcgtaatggcaatggttttcaatgaaaatgatgtatcgctgcgt
gatttggatagatgggtcaagacaaatggtaaattacaattccaagaggctatcaaatct
atgaaatctttacatttaataataccaagtaaaggtaacggtactctgatgattagtttg
aatcctacttttaaagaaagctttagaaatgccttgacagggggtgaaattaataattcg
ttcggtattgtcgtcgataatgaagcggaacaaagtagaatcacattaaatttccttgac
gaatattctgcaaataaatgggaaactatcttacatttcatggtgggtactcccttggcc
aatataccatcccataatgttttaaatttactgaaaaatagtagattgatggaagaagct
gataaaacaggcacattgaaaatcacaaatgagggttttcaatttctgttgcaagaaata
aattcacaaatttggactctattattacaatatttgaaaatgtctgaatcgttacaaatg
gatcctgtggaagttttaaactttattttcatgcttggtgctttggaaattgggaaggca
tacagtattgatggattaactgaaactcaaaagacaatgttaagagattttagagactac
ggtataatattccaaaaaaatcttacatctaagtcattctacccaaccaatcttgcgatt
atgttgacttcagatacaagaagtatactgagaacagcgtcaggtgccatggatagtgta
ttaaggcaaaataaagaggattccaagaagcaaacttctggtgacaatgttacagaggat
acagcaaatgatatagaacagatcgggctggaaaatcaagaaggtagagatggctcctta
attattgaaacgaatttcaaattatattcatattcaaattcacctttacagattgcaatc
ttaagtttattcgtacatttgaaatcaagatttgtgaatatggtaacgggacaaataaca
agagaatccatcagaagagcattggttaatggtattacagcagatcagattattgcatat
ttagaaactcatgcacatccacgaatgcgaagattagcagaagaaaaattagagaaaaaa
ttagaattagatccaaatagtaaagacactttacaaattttacctccaactgttgttgat
caaattaaattatggcaattagaactagatagagtcataacatacgatgggtcattatat
tcagattttgaaaatagtacagaatataatatgctgagtaaatatgcccaagatattggc
gtgttaatatggaaggatgacaagaagagaaagttttttgtatcgaaagaaggtaacaca
caggtgctggactacgctaaaaggaaattgaaaaagaaagcttga
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