KEGG   Kaistia sp. 32K: K32_01750
Entry
K32_01750         CDS       T06998                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
kai  Kaistia sp. 32K
Pathway
kai03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:kai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    K32_01750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kai03400]
    K32_01750
Enzymes [BR:kai01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     K32_01750
DNA repair and recombination proteins [BR:kai03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     K32_01750
SSDB
Motif
Pfam: LigD_Prim-Pol LigD_N DNA_ligase_A_C DNA_ligase_A_M RNA_ligase DNA_primase_S
Other DBs
NCBI-ProteinID: BCP51558
UniProt: A0A7R7T261
LinkDB
Position
complement(195252..197876)
AA seq 874 aa
MAATLETYRSKRDFKTTPEPAGRKPARAKTKPGFSYVIQKHDATRLHYDFRLEMDGVLKS
WAVTRGPSLDPSEKRLAVHVEDHPLEYGGFEGTIPKGEYGGGTVLLWDRGSWEPVGDPHK
GYAKGHLEFELKGEKLHGRWHLVKMHGKPREKRENWLLIKAEDEEARPAGAPDILDEMPD
SVTTGRAIADVENEAPGWSSKTGKIEKSARKKAASRAAKAEETPEPPPPLPDPATLPGAK
KARMLNFVEPALATLADTPPAGARWIHEIKFDGYRLQAHVAAGRVKLLTRTGLDWTKKFG
KEIVAALQALPLGTALIDGELVVETASGASDFSALQADLSEGRSDRFIFYAFDLIYLDGY
DLRELPLSERKQVLAQVVADGAPLLRLSQHFEEDGAVVFHHAQRLGLEGIVSKVLDSPYR
SGRSKTWLKTKSSQRQEFVIGGYVPSTTSRRAIGSLVLGVHENGTLQPVGRVGTGFSSRM
AEDLFQTLERMRVTTSPFGRPLTAEEGRQVRFVRPELVAEIEYRAWTADGHLRHAAFRGL
REDKPADEITREMPTMSETGKAKGKVAAKAKDAAEAESHGIKLTHPDRIYWPDAGVTKEG
LADYYAEIWPHIAPFVTDRPLSLLRCPSGINGEQFFQKNAWKGLNAAIRLVDDPSTAAVE
QLISIADLDGLIALVQSAVLEIHPWGSTVADWERPDMIIMDLDPGEGVDWETVITAAGEV
RQRLSDAGLEPFVKTSGGKGLHVVAPLTPKAEWPAVKAFTKGLADAMAGDSPDHYVATIT
KAKRPGKILIDYLRNQRGQTAVAPYSTRARPGAPVSAPLAWEELTPGIGPSYFTVLNMPT
RLAALARDPWADFRKAAAPLREPKQPAKKQPAKA
NT seq 2625 nt   +upstreamnt  +downstreamnt
atggccgcgacgctcgaaacctatcgcagcaagcgcgacttcaagaccacgccggagccg
gccggccgcaagccggcccgggcgaagacaaagcccggcttcagctatgtcatccagaag
cacgacgcgacgcggctgcactatgatttccgcctggagatggacggcgtcctgaaaagc
tgggccgtgacgcgcggcccgagcctcgatccctcggaaaagcggctcgccgtgcatgtc
gaggaccatccgctcgaatatggcggcttcgagggcaccatcccgaagggggaatatggc
ggcggcaccgtgctgctctgggatcgcggcagctgggagccggtcggcgatccgcacaag
ggctacgccaagggccatctcgaattcgagctgaagggcgagaagctgcatggccgctgg
catctagtgaagatgcacggcaagccgcgcgagaagcgcgagaactggttgctgatcaag
gccgaggacgaggaggctcgtccggccggcgcgcccgacatccttgacgagatgccggat
tcggtgacgaccggccgcgccatcgccgatgtcgagaacgaggcgcccggctggtcgtcg
aagaccggcaagatcgagaagtcagccaggaagaaggcagcgtcccgcgcggccaaggcc
gaagagacgcccgagccgcccccgcccctgcccgatccggcgacgctcccgggcgcgaag
aaggcgcgcatgctgaacttcgtcgaaccggcgctggcgaccctggccgacaccccgccc
gccggcgcgcgctggatccacgagatcaagttcgacggctaccgcctgcaggcgcatgtc
gcggccgggcgggtgaagctcctgacccgtaccgggctcgactggaccaagaagttcggc
aaggagatcgtcgccgcactgcaggcgctgcccctcggcacggcgctgatcgacggcgag
ctggtggtcgagacggcgagcggggcgtcggatttctccgccctccaggcggatctgagc
gagggccgctccgatcgcttcatcttctacgccttcgacctcatctatctcgacggctac
gaccttcgcgaactgccgctttccgagcgcaagcaggttctcgcacaggtcgtggcggac
ggcgcgccgctgctccgtctcagccagcatttcgaggaagacggcgcggtggtctttcac
catgcacagcggcttggtctcgaaggcatcgtctcgaaggtgctggattcgccctatcgc
tccggccgcagcaagacctggctgaagacgaagagctcgcagcggcaggaattcgtcatc
ggcggctatgttccttcgacgacgtcgcgccgggccatcgggtcgctggtgctcggcgtt
cacgagaatggcaccctgcagccggtcggccgcgtcggcacgggcttttcgtcccgcatg
gcggaagacctgttccagacgctggagcggatgcgggtcacgaccagcccgtttggccgc
ccgctgacggcggaggaaggccggcaggtacgcttcgtgcggccggaactggtcgccgag
atcgaatatcgcgcctggacggcggacgggcatctgcgccacgctgccttccgcggcctg
cgggaagacaagcccgccgacgagatcacccgggagatgccaaccatgtccgagacaggc
aaggcgaagggaaaggtggcggcaaaggcgaaggatgccgccgaggctgagtctcacggc
atcaagctgacccatcccgatcgcatatactggccggacgcgggcgtcaccaaggagggc
ctcgccgattactacgccgagatctggccgcatatcgcacccttcgtcaccgaccggcct
ctgtcgctgctgcgctgtccgagcggcatcaacggcgagcagttcttccagaagaacgcc
tggaagggcctgaacgccgcgatccggctggtcgacgatccgtcgacggcggcggtggag
caactgatcagcatcgccgatctcgacgggctgatcgccctggttcagtccgccgtgctg
gaaatccacccgtggggctcgacggtcgccgactgggagcggccggacatgatcatcatg
gatctggaccccggcgagggcgtcgactgggagaccgtcatcaccgcggccggcgaagtc
cgccagcgcctcagcgacgccggcctcgagcccttcgtcaagacgtcaggcggcaagggc
ctgcatgtggtggcgccgctgacgcccaaagccgagtggccggcggtcaaggctttcacc
aagggcctcgccgacgccatggcgggcgacagtcccgaccactatgtcgcgacgatcacc
aaggcgaagcggccgggcaagatcctgatcgactatctgcgcaaccagcgcggccagacg
gcggtggcgccctattcgacccgggcgcgtcccggcgcgcccgtctcggcgccgctcgcc
tgggaggaactgacgccgggcatcgggccttcctatttcaccgtgctcaacatgccgacc
cggctcgccgccctcgcgcgcgacccatgggcggatttccgcaaggccgccgcgccgctc
cgcgagccaaagcagccagcgaagaagcaaccggccaaggcctga

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