Kaistia sp. 32K: K32_01750
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Entry
K32_01750 CDS
T06998
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
kai
Kaistia sp. 32K
Pathway
kai03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
kai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
K32_01750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kai03400
]
K32_01750
Enzymes [BR:
kai01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
K32_01750
DNA repair and recombination proteins [BR:
kai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
K32_01750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_C
DNA_ligase_A_M
RNA_ligase
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
BCP51558
UniProt:
A0A7R7T261
LinkDB
All DBs
Position
complement(195252..197876)
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AA seq
874 aa
AA seq
DB search
MAATLETYRSKRDFKTTPEPAGRKPARAKTKPGFSYVIQKHDATRLHYDFRLEMDGVLKS
WAVTRGPSLDPSEKRLAVHVEDHPLEYGGFEGTIPKGEYGGGTVLLWDRGSWEPVGDPHK
GYAKGHLEFELKGEKLHGRWHLVKMHGKPREKRENWLLIKAEDEEARPAGAPDILDEMPD
SVTTGRAIADVENEAPGWSSKTGKIEKSARKKAASRAAKAEETPEPPPPLPDPATLPGAK
KARMLNFVEPALATLADTPPAGARWIHEIKFDGYRLQAHVAAGRVKLLTRTGLDWTKKFG
KEIVAALQALPLGTALIDGELVVETASGASDFSALQADLSEGRSDRFIFYAFDLIYLDGY
DLRELPLSERKQVLAQVVADGAPLLRLSQHFEEDGAVVFHHAQRLGLEGIVSKVLDSPYR
SGRSKTWLKTKSSQRQEFVIGGYVPSTTSRRAIGSLVLGVHENGTLQPVGRVGTGFSSRM
AEDLFQTLERMRVTTSPFGRPLTAEEGRQVRFVRPELVAEIEYRAWTADGHLRHAAFRGL
REDKPADEITREMPTMSETGKAKGKVAAKAKDAAEAESHGIKLTHPDRIYWPDAGVTKEG
LADYYAEIWPHIAPFVTDRPLSLLRCPSGINGEQFFQKNAWKGLNAAIRLVDDPSTAAVE
QLISIADLDGLIALVQSAVLEIHPWGSTVADWERPDMIIMDLDPGEGVDWETVITAAGEV
RQRLSDAGLEPFVKTSGGKGLHVVAPLTPKAEWPAVKAFTKGLADAMAGDSPDHYVATIT
KAKRPGKILIDYLRNQRGQTAVAPYSTRARPGAPVSAPLAWEELTPGIGPSYFTVLNMPT
RLAALARDPWADFRKAAAPLREPKQPAKKQPAKA
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgacgctcgaaacctatcgcagcaagcgcgacttcaagaccacgccggagccg
gccggccgcaagccggcccgggcgaagacaaagcccggcttcagctatgtcatccagaag
cacgacgcgacgcggctgcactatgatttccgcctggagatggacggcgtcctgaaaagc
tgggccgtgacgcgcggcccgagcctcgatccctcggaaaagcggctcgccgtgcatgtc
gaggaccatccgctcgaatatggcggcttcgagggcaccatcccgaagggggaatatggc
ggcggcaccgtgctgctctgggatcgcggcagctgggagccggtcggcgatccgcacaag
ggctacgccaagggccatctcgaattcgagctgaagggcgagaagctgcatggccgctgg
catctagtgaagatgcacggcaagccgcgcgagaagcgcgagaactggttgctgatcaag
gccgaggacgaggaggctcgtccggccggcgcgcccgacatccttgacgagatgccggat
tcggtgacgaccggccgcgccatcgccgatgtcgagaacgaggcgcccggctggtcgtcg
aagaccggcaagatcgagaagtcagccaggaagaaggcagcgtcccgcgcggccaaggcc
gaagagacgcccgagccgcccccgcccctgcccgatccggcgacgctcccgggcgcgaag
aaggcgcgcatgctgaacttcgtcgaaccggcgctggcgaccctggccgacaccccgccc
gccggcgcgcgctggatccacgagatcaagttcgacggctaccgcctgcaggcgcatgtc
gcggccgggcgggtgaagctcctgacccgtaccgggctcgactggaccaagaagttcggc
aaggagatcgtcgccgcactgcaggcgctgcccctcggcacggcgctgatcgacggcgag
ctggtggtcgagacggcgagcggggcgtcggatttctccgccctccaggcggatctgagc
gagggccgctccgatcgcttcatcttctacgccttcgacctcatctatctcgacggctac
gaccttcgcgaactgccgctttccgagcgcaagcaggttctcgcacaggtcgtggcggac
ggcgcgccgctgctccgtctcagccagcatttcgaggaagacggcgcggtggtctttcac
catgcacagcggcttggtctcgaaggcatcgtctcgaaggtgctggattcgccctatcgc
tccggccgcagcaagacctggctgaagacgaagagctcgcagcggcaggaattcgtcatc
ggcggctatgttccttcgacgacgtcgcgccgggccatcgggtcgctggtgctcggcgtt
cacgagaatggcaccctgcagccggtcggccgcgtcggcacgggcttttcgtcccgcatg
gcggaagacctgttccagacgctggagcggatgcgggtcacgaccagcccgtttggccgc
ccgctgacggcggaggaaggccggcaggtacgcttcgtgcggccggaactggtcgccgag
atcgaatatcgcgcctggacggcggacgggcatctgcgccacgctgccttccgcggcctg
cgggaagacaagcccgccgacgagatcacccgggagatgccaaccatgtccgagacaggc
aaggcgaagggaaaggtggcggcaaaggcgaaggatgccgccgaggctgagtctcacggc
atcaagctgacccatcccgatcgcatatactggccggacgcgggcgtcaccaaggagggc
ctcgccgattactacgccgagatctggccgcatatcgcacccttcgtcaccgaccggcct
ctgtcgctgctgcgctgtccgagcggcatcaacggcgagcagttcttccagaagaacgcc
tggaagggcctgaacgccgcgatccggctggtcgacgatccgtcgacggcggcggtggag
caactgatcagcatcgccgatctcgacgggctgatcgccctggttcagtccgccgtgctg
gaaatccacccgtggggctcgacggtcgccgactgggagcggccggacatgatcatcatg
gatctggaccccggcgagggcgtcgactgggagaccgtcatcaccgcggccggcgaagtc
cgccagcgcctcagcgacgccggcctcgagcccttcgtcaagacgtcaggcggcaagggc
ctgcatgtggtggcgccgctgacgcccaaagccgagtggccggcggtcaaggctttcacc
aagggcctcgccgacgccatggcgggcgacagtcccgaccactatgtcgcgacgatcacc
aaggcgaagcggccgggcaagatcctgatcgactatctgcgcaaccagcgcggccagacg
gcggtggcgccctattcgacccgggcgcgtcccggcgcgcccgtctcggcgccgctcgcc
tgggaggaactgacgccgggcatcgggccttcctatttcaccgtgctcaacatgccgacc
cggctcgccgccctcgcgcgcgacccatgggcggatttccgcaaggccgccgcgccgctc
cgcgagccaaagcagccagcgaagaagcaaccggccaaggcctga
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