Kordia antarctica: IMCC3317_17590
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Entry
IMCC3317_17590 CDS
T06371
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase Rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kan
Kordia antarctica
Pathway
kan03420
Nucleotide excision repair
kan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IMCC3317_17590 (rep)
03430 Mismatch repair
IMCC3317_17590 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kan03400
]
IMCC3317_17590 (rep)
Enzymes [BR:
kan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IMCC3317_17590 (rep)
DNA repair and recombination proteins [BR:
kan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IMCC3317_17590 (rep)
MMR (mismatch excision repair)
Other MMR factors
IMCC3317_17590 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
UvrD-helicase
AAA_30
Viral_helicase1
AAA_11
UvrD_C
DEAD
ResIII
T2SSE
ddrB-ParB
TrwB_AAD_bind
AAA_22
AAA_7
SLFN-g3_helicase
DnaB_C
Fer4_12
AAA_16
AAA_29
PAH
ABC_tran
DUF87
Motif
Other DBs
NCBI-ProteinID:
QHI36396
UniProt:
A0A7L4ZJL5
LinkDB
All DBs
Position
2136443..2138458
Genome browser
AA seq
671 aa
AA seq
DB search
MASEVDQIIKTMQSGNHFLLSGGAGSGKTHTLIDLIQRINEEEPKSKIACITYTNVAADE
ITDRVKSSSLKASTIHDFLWDNIKGFQANLKDAIIELNDDVSTEDLSNDIEIQYREYKSL
KKGVISHNEVIQIAKYLFEEHPLLCKILGDKLDYIFVDEYQDTSTEVIEILFKNLNLKSI
DLRIGLFGDSMQSIYDKGIGKLNINQLINNDFQRKLTKVEKILNRRNPQSIIDLANELRD
DDLKQDPSKNTDAPNINKDGTIKKGNITFLYSSLGDKALKDITTSKYCSDWNFLDFDKKG
KPLSKVLFIRNRTIAKHAEFNTLFEIYTKDKIVGKGGYIKRIKDYLKTVDIEYDTDSFSL
LELLNKLIKEFDQGLDFKKAIDLIKKEEPNFDTIQKAINSVKRMHPGIEKILPTGAMYTH
IIDNSDLFDMALSMPFKDLTKIYLDKEKLIGNKKSKNSESNTRNDEKDALIKYLFKVQEI
ISLYQDKNINTLLKKVDFKIRVGKDKTVLKSKMDELCSLTTLKIKYVLEYAESSGILEFD
SKVSDFITSNDYLLERVNRVDYLELINLYNYTEGLSSYSTQHGVKGEEFDNVLVVINNDK
IHQLSICYEYLFEGKSDDEKYFNRTLNLFYVACTRPKEDLIVFYEGECSQKTILKANEWF
ENVIDLNQINQ
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagaagtagatcaaattattaaaacaatgcagtcaggtaaccattttctatta
agtggtggggcaggaagtggaaaaacacatactttaattgatttaattcaaaggattaat
gaagaagaacctaaatcaaaaattgcatgtattacttacactaatgttgctgcggatgaa
attaccgatagagtaaaatcttcatctttaaaagcttctacaattcatgattttttatgg
gataatataaaaggatttcaagctaatcttaaagatgctattattgaactaaatgatgat
gtatctacagaagatttatcaaatgatatagagattcaatatcgagaatataagagttta
aaaaaaggagtcatttcgcataatgaagttattcaaattgcgaagtatctttttgaagaa
catcctcttttgtgtaaaatattaggtgataagttagattatatttttgtagatgagtat
caagatacatctacagaggttatagaaattctatttaaaaatcttaatctaaaaagcatt
gatttgagaattggactttttggagatagcatgcaatcaatttatgataaaggaataggt
aagctaaacattaatcagttaataaataatgattttcaacgaaaactaacaaaagttgaa
aaaatattaaatagaagaaatcctcaatcgattattgatttagctaatgaattgagagac
gatgatttgaaacaagatccttcaaaaaatactgatgctccaaatattaataaagatgga
actattaaaaaaggaaatattacctttttatattcttctttaggagataaagcactaaaa
gatataactacaagtaagtattgttctgattggaattttctagattttgataagaaagga
aaacctttatcaaaggtcttatttattagaaatcgtactatagctaaacatgcagaattc
aacaccttattcgagatttacacaaaagataagattgttggaaaaggaggatatattaaa
cgtattaaagattatttgaaaacagtagatattgagtatgatacagattcattttcactt
ttagagcttttaaataaattaatcaaagaattcgatcaagggttagacttcaaaaaagct
attgatttaattaaaaaggaagaaccaaatttcgatacaattcaaaaagctatcaattct
gtaaaaagaatgcacccaggaattgaaaaaattctacccacaggtgcaatgtatactcac
attattgataatagcgatttatttgatatggctttatctatgccattcaaagatttaaca
aaaatatatctagataaggaaaaacttattggaaataaaaagagtaaaaattctgaatca
aatacaagaaatgatgaaaaagatgcactaattaaatatttatttaaagttcaagaaatc
atatcactttatcaggataaaaacataaataccttgctaaaaaaagtagattttaaaatt
cgcgtagggaaagacaaaacagttttaaaaagcaaaatggatgaattatgttcgctcact
actttgaagattaaatatgttttagaatatgcagaaagctctggtattttagaatttgat
tcaaaagtttctgatttcattactagtaatgattatctacttgaaagagtaaatagagtt
gattatttagaacttataaacctttacaattatactgagggtttaagttcatattcaact
caacatggagtaaaaggagaagaatttgataatgttttagttgttataaataatgataaa
atccatcaactttctatttgttatgaatatctatttgaaggaaaatctgacgatgaaaaa
tattttaatagaacattaaatcttttttatgttgcttgcacacgtcctaaagaagatttg
attgtattttatgaaggagaatgttctcaaaaaactatcttgaaagcaaatgaatggttt
gaaaatgtaattgacttgaatcaaattaatcaatga
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