Kaistella sp. 97-N-M2: L0B70_12100
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Entry
L0B70_12100 CDS
T08605
Symbol
ligD
Name
(GenBank) DNA ligase D
Organism
kaq
Kaistella sp. 97-N-M2
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
DNA_ligase_OB_2
RPA_C
Motif
Other DBs
NCBI-ProteinID:
UJF29565
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Position
2582448..2585180
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AA seq
910 aa
AA seq
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MALEKYREKRSTDKTPEPFGGKPSGKDLRFVVQKHDASHLHYDFRLEMDGVLKSWAVPKG
PSLDPDVKRLAMMVEDHPYDYRTFEGIIPKGQYGGGTVIVWDEGTYEPAEPVSKDRKKKE
KDLLHQLHAGKLKFRMNGEKLKGEFALVKVHGRGENGWLLMKLDDEFATTKDVTSQDESV
ISHKTIAEMEAAPDEVYGQKKDKKAAKKNTDKGSEKTPKKSAAKSSEKVSKEIKNKTAKA
ESTTSKTDIRKLLKKCPRQKFYDSVEPMLATLVNEPFDDPDWIYEVKWDGYRAVAFMNEG
AVSMKSRNNKSFNEKFYSVYNTLTKMKLNAILDGEVVVVGTSGKADFGGLQNWRSEADGD
LVYYVFDVLWYEGYDLKALTLLERKAVLEHILPESNSIMLSQVFDTSGIEFLKAAKKMDL
EGIMAKRKDSTYHVKNRTKEWLKIKATKRQEVVIGGYTKNEGTSKRFSSLLLGVYEGKDL
IYTGKVGTGFNAKDQKEMMKMFEPLVTDKPPFSAEPDVNKPSRFRPDPPHATVTWLKPKL
LCEVSFTELTSDGIMRHPSFQGMRTDKSAKKVVLEKELPVEEVLSDDKPLVKSRAKAGRK
TLLNPKDKTQVRKVTKHELKFTNLNKIFWPAEQLTKRDLINYYYQVAPYILPYLKDRPQS
MNRFPDGIEGEGFYYKDVTGKAPDWVKTYLYKSDSDKRNRKYLVGKDEATLLYMANLGCI
EMNPWSSTVKKPNHPTFCIIDLDPDQNPFDDVIEAALVTKNVLDSMGVPSFCKTSGSTGL
HIYIPLGNKYTYEQSKEFARVIVTLVQRELPKTTSIERIIKNRGGKIYLDFLQNRPHATV
AAAYSLRPKPGATVSMPLHWDEVKKGLKMSDFTIHNALERLESEGDIFKPVLGKGIDLKK
VIKKFSGEDI
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggctttagaaaaataccgcgaaaaacgatccacggacaaaacaccagaaccttttggt
ggcaaaccctccggaaaagacttgcgctttgtcgttcaaaaacacgatgcgtctcacttg
cattatgattttcgtctcgaaatggacggcgtgctgaaaagctgggccgttccgaaaggt
ccttctctcgatcccgatgtaaagcgcctcgccatgatggtggaagatcacccctatgat
taccgcacctttgaaggcatcattccgaaagggcagtacggcggcggcaccgtcatcgta
tgggacgaaggaacttatgaacccgcagaaccggtttccaaggacaggaaaaagaaggaa
aaggatctgttgcatcagcttcatgccggcaaactgaaattccgcatgaacggcgaaaaa
ctgaaaggcgaatttgccctggttaaagttcacgggcgcggcgaaaacggctggcttctc
atgaaactcgacgacgaatttgcgacgacgaaagatgtaacttctcaggacgaatcggtg
atttcccacaaaaccatcgccgagatggaggcagcacccgatgaagtctacggtcagaaa
aaagataaaaaagccgctaaaaaaaacacggataaaggttcagaaaaaacaccgaaaaaa
tcggcggcgaaatcttcggaaaaagtaagcaaagaaattaaaaacaaaaccgccaaagca
gaaagcaccacatcaaaaacagatatccggaaacttttaaaaaaatgtccgcgccagaaa
ttttacgacagcgtcgaaccgatgctcgcaaccctggtgaatgaacctttcgacgatccg
gactggatttacgaagtgaaatgggacggttaccgcgccgtggcttttatgaatgagggc
gcagtctccatgaaatcgcgcaacaacaaaagctttaatgagaaattttattccgtttat
aataccttaacaaaaatgaagctcaacgccattctcgatggggaagtggtcgtggtgggc
acaagcggaaaagccgatttcggcggcctccagaactggcgcagcgaagcagacggtgat
ctcgtgtattacgttttcgatgtgctttggtatgagggttacgacctgaaagcattaacg
ctgctggaaagaaaagccgtactggaacatattcttcccgaaagcaattccatcatgctc
agccaggtctttgatacgtccggaattgaatttttgaaagccgccaaaaaaatggacctt
gaaggcattatggccaaacggaaagacagcacctatcacgttaaaaaccgtacaaaagag
tggctcaaaattaaagccaccaaacgccaggaagttgttattggcggttacaccaaaaat
gaaggcaccagcaaacggttcagcagccttctgctcggtgtttatgagggcaaggaccta
atttatacaggaaaagtcggcaccggttttaatgcgaaagaccagaaggagatgatgaaa
atgtttgaaccgctcgtaaccgataaaccgcctttttctgcggagcccgacgtcaacaaa
ccgtcgcggttccgtccggatccgccgcacgccaccgtaacctggctcaagccgaaactg
ctgtgtgaagtcagttttacggaactcacctccgacggaattatgcgtcacccttccttt
cagggtatgcggaccgataagagcgccaagaaagttgttctggaaaaagaacttcctgtg
gaagaagtgctgtccgatgataaacccctcgtaaaatcgcgcgcaaaagctgggcggaaa
actttactgaatccaaaagataaaacgcaggttcggaaagtcacgaaacacgaacttaag
tttacgaacctcaacaagatcttctggcccgcggagcagctcacaaagcgcgatctaatc
aattattattatcaggtggcaccttatattttgccttacttaaaagaccggccgcaaagc
atgaaccgctttcccgacggcatcgaaggcgaaggattttactacaaggatgtcaccgga
aaagcccccgactgggtgaaaacctatctctacaaaagcgacagcgacaagcgaaaccgc
aaatatctcgttgggaaggatgaagccacgttgttgtatatggccaatctcggctgcatc
gaaatgaacccctggagcagcaccgtgaagaagcctaatcatccgacgttctgtattatc
gatctcgatcccgaccaaaatccatttgatgatgtcatcgaagccgcgctcgttacgaaa
aacgtgctggacagcatgggcgtgccttccttctgcaaaaccagcggatctacaggtctg
cacatttacattccgttggggaacaaatacacctacgaacagtcgaaggagtttgcgcgc
gtgattgtgacactcgtccaaagagaattgcccaaaaccacgagcatcgagcgtattatt
aaaaaccgcggcggaaaaatctacctggattttcttcaaaaccgtccgcatgccaccgtc
gccgcggcgtattcgctgcgcccgaaacccggagccacggtatccatgccgcttcactgg
gacgaagtaaagaaaggcctgaagatgagcgatttcactattcacaacgctctggaacgc
cttgaaagcgagggcgatattttcaaacccgtcctcgggaaaggcattgatttaaagaag
gtgattaaaaagttttccggggaggatatttaa
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