Kluyvera cryocrescens: RIN60_15160
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Entry
RIN60_15160 CDS
T09399
Symbol
ldtD
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
kcy
Kluyvera cryocrescens
Brite
KEGG Orthology (KO) [BR:
kcy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kcy01002
]
RIN60_15160 (ldtD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kcy01011
]
RIN60_15160 (ldtD)
Peptidases and inhibitors [BR:
kcy01002
]
Cysteine peptidases
Family C82
RIN60_15160 (ldtD)
Peptidoglycan biosynthesis and degradation proteins [BR:
kcy01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RIN60_15160 (ldtD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WNN70407
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All DBs
Position
complement(3170300..3172084)
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AA seq
594 aa
AA seq
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MLLTKKNGRRLSAVSLCLTMTFAPLFTAFADEPEVVPSDSTALPAEPSAVLLHPGSQSSA
MASLAGSQPLAEGAAAASRAEIQSLLPAGYQPVYLNPLVTLYAARGMKPMWENRDAVRAF
QQQLAEVAIAGFQPQFTRWVELLTDPSVSGMTRDVVLSDALMGYLHFLSGIPVQGNRWLY
SDKPYTLATPPLSVINQWQLALDSGALPQFIAALAPQHPQYAVMHQALLALTGDSRPWPK
LTSTASLRPGQWSSDVPALREILQRNGVLDSGPDIALPGDNIGKTRKTTKSSAAAYDPTL
VAAVKRFQAAQGLGADGVIGASTRDWLNISSAQRAGVLALNIQRLRLLPGKVSTGIMVNI
PAYSLVYYLNGSEALASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARNDILPKLR
DDPGYLERHNYTVLRGWNSKEAIDPWRVDWSTITASNLPFRFQQAPGERNSLGRYKFNMP
SSDAIYLHDTPNHNLFQKDARALSSGCVRVNKASDLANMLLQDAGWNDARISDALKQGNT
RYVNIRQNIPVNLYYLTAFVGPDGQTQYRTDIYNYDVTARSGAQILPKAEQLIR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttactaagaaaaatggtcgtcgattgtcagccgtaagtttgtgcctgacaatg
acatttgctccactgtttaccgcttttgcagatgaacccgaggtggttccatctgatagc
accgcgctgcctgcggaaccgtcagcggtcctcctgcacccgggttcgcaatcatcggcg
atggcgagtctggcggggagtcagcctctggccgagggggccgcggcggcaagtcgcgcc
gaaatccagtctcttttgcctgccggataccaacctgtctatcttaacccgctggtgacg
ctgtatgccgcccgcggaatgaaaccgatgtgggaaaaccgcgacgcggttcgcgctttc
cagcagcagttagccgaggtggcgattgccggtttccagccgcagtttacccgctgggta
gagctgctcaccgatcccagcgtcagtggtatgacgcgcgatgtggtgttatccgatgcg
ctgatgggctacctccactttcttagcggtattcccgtgcagggcaatcgctggctgtac
agcgataagccttatactctggcgacgccgccattatcggtaattaatcagtggcaactg
gcgcttgatagcggtgcgctgccgcagtttattgcagctctggcgccacaacatccgcaa
tatgccgttatgcatcaggcgctgttggccctgacgggagattcacgcccgtggccgaaa
ctgacctcaacggcttctttacgtcctggtcaatggagtagcgacgttccggcgctgcgc
gagattttgcagcgcaacggcgtgctggactccgggccggatattgcgctgcctggcgat
aatattggcaagacccggaaaacgacgaagtccagcgctgctgcttacgacccaacgctg
gtggctgcggtcaaacgtttccaggcggcgcaagggctgggtgctgatggggtgatcggg
gcatcaacgcgtgactggctaaatatctcttctgctcagcgtgcgggcgtcctggcactc
aatattcagcgtttacgcttgctcccgggaaaagtctctaccggcattatggtgaatatt
cctgcctactcgttggtttactacctgaacggtagcgaagccttggcttcgcgcgttatt
gtcgggcgtccggaccgcaaaacgccgatgatgagcagtgcgctgaataacgtggtggtg
aacccaccgtggaatgtaccgccaaccctggcgcgtaacgatatcctgccgaaactgcgt
gatgatccaggctaccttgaacgtcacaattatacggttttgcgcggctggaatagcaaa
gaagccatcgatccgtggcgcgttgattggtcaaccatcacggcgtcgaatttaccgttc
cgcttccagcaggcgccaggagagcgtaattctttagggcgctataaatttaatatgccc
agttcggatgctatttatctccacgatacgccgaaccataatctgttccagaaagatgca
agggcattaagctcaggatgtgtacgtgtaaataaagcttccgatctggcaaatatgttg
ttacaggatgccggctggaatgatgcgcgaatttcggatgcgctgaaacaggggaatacc
cgctacgttaatatccggcaaaatatcccggttaacctctattatctgaccgcctttgtc
gggcctgatggtcagacacaatatcgaacagatatttacaattatgatgttactgcgcga
tccggtgcacaaattttgccaaaagcggaacaattaatcagataa
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