Kroppenstedtia eburnea: GXN75_08825
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Entry
GXN75_08825 CDS
T06618
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
keb
Kroppenstedtia eburnea
Pathway
keb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
keb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GXN75_08825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
keb03400
]
GXN75_08825
Enzymes [BR:
keb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
GXN75_08825
DNA repair and recombination proteins [BR:
keb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GXN75_08825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
mRNA_cap_enzyme
DNA_ligase_OB_2
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QKI82097
LinkDB
All DBs
Position
1800166..1801077
Genome browser
AA seq
303 aa
AA seq
DB search
MKFIAPMEPVPRQEVFASEDWLYQVKWDGIRMLAFLERGQVELFNRKQRRRTLWYPELTD
EVAGLACTSAVLDGEVIVLHEGRPDFFRVLKRELLSDPNRLPSILGRIPVQYTVFDLLSL
DGRNLMKEPLTHRLETLTRLLPPASSVLHLCDSFDDGPGLWEATRQQQLEGIVMKERKSP
YHSGQKHPSWQKVKHFQTLTATAVGVFTRGSLVQSILLGLEGEDGWTYIGRAGSGLSERE
RRLLTEAVPGLKRGSPVVLNPPSARLPTIWLEPVLRVEVRYLEWTPQGTLRSPTVIGFRL
PGS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtttatcgctcccatggaacctgttccccgacaagaagtgttcgcatccgaagac
tggctgtatcaggtgaaatgggatgggatccgcatgctggcctttttggaacggggtcag
gtggagcttttcaatcggaagcaaaggcgccggactctctggtaccccgaactgaccgat
gaagtggccgggcttgcttgcacatcggctgtcttggacggagaagtgatcgtacttcat
gaggggcgaccggattttttccgggtgttaaagcgggaactcttgtcggatccgaacagg
ctcccctccatcctgggccggattcccgttcaatatacggtttttgatctgttgtctctg
gacggacgcaatctgatgaaagagcctttgacccatcgattggagaccctgacccggttg
ctccccccggcgtcatccgtcctccatctttgtgacagctttgatgacggtccgggttta
tgggaagccacccggcagcagcagttggaagggattgtgatgaaggaacggaagagtccc
taccattccgggcagaagcacccctcttggcaaaaggtgaaacactttcaaactctgaca
gccacagctgtgggagtgttcacccgcggcagtctggtacagtccattctgttgggactg
gagggggaggacgggtggacctatatcggtcgggcgggctccgggttgagtgagcgggag
cggaggttgttgaccgaagccgtccccggcttgaagcgtgggtctccggttgtgctcaat
ccgccatccgcccgcctccccaccatttggttggagccggtattgcgggtggaagtgcgt
tacttggaatggaccccccagggaacattgcgctcccccacggtgatcggattccgtctt
cccggttcatga
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