Kaistella flava (ex Peng et al. 2021): Q73A0000_11300
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Entry
Q73A0000_11300 CDS
T08317
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
kfa
Kaistella flava (ex Peng et al. 2021)
Pathway
kfa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Q73A0000_11300 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kfa03400
]
Q73A0000_11300 (mfd)
Enzymes [BR:
kfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q73A0000_11300 (mfd)
DNA repair and recombination proteins [BR:
kfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
Q73A0000_11300 (mfd)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRCF
DEAD
UvrB_inter
Helicase_C
CarD_TRCF_RID
ResIII
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
QOW10902
UniProt:
A0A7M2YBT5
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All DBs
Position
complement(2574382..2577801)
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AA seq
1139 aa
AA seq
DB search
MQLKNITETFLPQLLHLEFGKELFTQLDQNKHLAVKSFAGSSPAVIAAELFLIKKKSLLF
LTDDKEDALYITAELEDLLGKENVLYFPPTHLEPYQIEKTQNANLVLRTEVLNRIHNDKK
PRVMIAPFASLAEKVMKKDDFKAISHTIKTGDQLDFNFTEELLHQFNFNHTDFVSEPGEF
SVRGGIVDVFSYSNEEPYRITFFGNEVDSIKTFDIETQLSKEKVKEFQLVSNMNFSAQGT
KVSLFDLAPKDLVVVTKNAFVGFNFIKSFYEKAEVKFGTLGTEIRHLPPNELFVSEDDFS
KDINKFEWIDFTLQEVKGSDAEIVQLNQSPQPSFHKKFELLLEDLEEKQNDGFQTWISFS
SEKQKERLESIFEELISQQSSSDNDNDSKDFAEKKSKFLFKSFKSELHEGFVDLDHKISV
YTDHQIFDRYQRFKAKNSFAKSEQITLKDLMQMKVGDYITHIDHGIGKFMGLVKVNNNGK
VQECFKLTYKNGDLLYVSIHSLNKISKYNGPDGREIVLSKLGSPAWKALKQKTKAKVKQI
AFDLIRLYAQRKTAKGFAFTPDSYLQNELEASFIYEDTPDQEKATVDVKADMENDTVMDR
LICGDVGFGKTEIAIRAAFKAATDGKQVAILVPTTILAFQHYRSFTERLKDFPVTISYMN
RFRTAKQKAETLEGLKSGKIDIVIGTHQLVGSSVKFKDLGLLIIDEEHKFGVSVKDKLKT
IKSNVDTLTLTATPIPRTLQFSLMAARDLSVIKTPPPNRQPVDTQIVGFDEEMIRDAISY
ELQRDGQVYFINNRIENLKDIAGLIQRLVPDAKVITGHGQMDGKQLERNVLDFMEGKYDV
LVSTTIIESGVDVPNANTIFINDAQRFGMADVHQMRGRVGRSNRKAFCFLITPPFDMVTN
DARKRLEAIEQFSDLGSGFQIAMKDLEIRGAGDLLGGEQSGFINEMGFDTYQKIMQEALE
ELQNDEEFEDLFDNEEDRKKLFKSTKEVNIDTDLELMLPDSYVQSIEERLSLYQKLAEIE
SKEDLHKLELELIDRFGELPSEAINLLKSVELKWIAADIGFDKIVVKNGVFLGYFPPNPQ
DKFYQSEKFRNIISYLSKNPREATLKEKTSKEGNQLMMRKENVQNVDEVNSVLERILGK
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgcagttaaaaaacatcacagaaacatttcttccccaacttcttcatttagaatttgga
aaagaattgtttacacaactcgatcaaaataaacatcttgctgtaaagtcatttgcaggt
tcttctcctgcagtaattgcggcagaattatttttgattaaaaagaaatcgcttctattt
ttgaccgatgataaagaggacgctttatatatcactgcagaattagaagatttattgggc
aaagaaaatgtactttattttccaccaactcatttggaaccttatcagattgagaaaact
caaaatgccaatttggttttaagaaccgaagttttgaatagaattcacaacgataaaaag
ccaagagtcatgattgcgccatttgcatctttggcggaaaaggtgatgaagaaggatgat
tttaaagcgatttctcataccattaaaactggcgatcaactggattttaattttactgaa
gaattgcttcatcagtttaattttaatcataccgattttgtttctgaacctggcgaattt
tctgtgagaggtggaattgtggatgttttttcttattctaatgaagaaccttaccgaatt
actttttttggaaatgaagtcgacagcatcaaaacttttgatattgaaactcaactttca
aaagaaaaggtaaaggaatttcagttggtttctaatatgaatttttctgcgcagggaaca
aaagtttctttgtttgatctcgcaccgaaggatttagttgtagttacgaaaaatgcattt
gttggttttaattttattaaaagtttctacgaaaaagcagaagtgaaattcggaacttta
gggacggaaattagacatctcccgccaaatgaactttttgtttctgaagatgatttcagc
aaagacattaataaatttgaatggatcgattttactttgcaagaagtgaaagggagcgat
gctgaaattgttcaactgaatcaaagtccgcaaccgagttttcataaaaagtttgaactt
ttacttgaagatttagaagaaaaacaaaatgatggtttccaaacgtggatttcattctcc
tccgaaaaacagaaagagcgattagaatctatttttgaagaattaatttcacagcaatct
tcttcagataatgacaatgattcaaaagattttgcagagaagaaatcaaaatttttattt
aagtcttttaaatctgaacttcacgagggttttgtggatttagaccataaaatttccgtt
tataccgatcaccagatttttgaccgttaccaaagattcaaagccaaaaactcttttgca
aaatcagagcagattacactgaaagatttaatgcaaatgaaagtcggcgattatatcaca
cacatcgaccacggaattgggaaatttatgggtttggtcaaagtgaataataacggaaaa
gttcaggaatgttttaaattgacttataaaaatggcgacttattatatgtaagtattcac
tcattaaataaaatttcaaaatataatggtccagatggacgtgagattgttttatcaaaa
ctgggttctcctgcctggaaagctttaaaacagaaaacaaaagccaaagtaaaacagatt
gcttttgacttaattcgtttatatgcacaacggaaaacggcgaaaggatttgccttcaca
cccgattcttatttgcaaaatgaactggaagcgagctttatttatgaagatacgcccgat
caggaaaaagcgacggttgatgtaaaagcggatatggaaaacgataccgtaatggatcgt
ttgatttgtggtgatgtaggtttcggaaaaacagagattgcgattagagcagcgtttaaa
gcagcaactgatggaaaacaagtggcgattttagttcctacgacgattttagcttttcaa
cattatcgaagttttacagaaaggttgaaagatttcccggtaacgatttcttatatgaat
cgatttcgaactgcgaaacaaaaagccgaaactttagaaggattgaaatcaggaaaaatt
gacatcgtaattggaacgcatcaattggtgggaagttcggtaaaatttaaagatttaggc
cttttaattattgatgaagaacataaattcggtgtttccgttaaggacaaattaaaaacg
ataaaaagtaacgttgatactttaacattgactgcgacgccaattccgagaactttgcag
ttttcattaatggcagcgagagatttgtcggttattaaaacgccaccgccaaaccgtcaa
cctgttgatacgcaaattgttggttttgatgaggaaatgattcgcgatgcaatttcgtat
gaacttcaaagagacggacaggtttattttattaataatagaattgaaaatctgaaagat
attgctggcttaattcaacgcttagttcctgatgcgaaagtaattacaggccacggacaa
atggatggaaagcaattggagcgaaatgttctggattttatggaagggaaatatgacgtt
ttggtttctaccaccattatcgaaagtggagtagatgttccgaatgcgaacacgattttt
attaatgatgcacagcgttttggaatggcagatgttcaccagatgcgcggccgtgtcggt
cgaagtaatcgaaaagcattttgttttctgattacgccgccgtttgatatggttactaat
gatgcccgaaaaagactggaagcgattgaacagttttccgatttgggaagcggttttcag
attgcgatgaaggatttagaaattcgtggcgccggagatttattaggcggtgaacaaagt
ggttttattaatgaaatgggatttgatacgtatcagaaaatcatgcaggaagctttggag
gaacttcagaacgatgaggaattcgaagatttatttgataatgaagaagaccgtaaaaaa
ctttttaaatcgaccaaagaagtaaatattgatacggatttagaattaatgttgcctgat
tcttatgttcaaagtattgaggaaagattgtcattatatcaaaaattagcagagattgaa
agcaaagaggatttgcataaattagaactggaattgatcgaccgtttcggagaattacct
tccgaagcgattaatcttttgaaatcggtagaactgaaatggattgcagccgatattggt
tttgataaaatcgtggtgaagaatggagtttttctcggttatttcccgcctaatcctcag
gataagttttatcaaagtgaaaaattcaggaacattatttcttatttatcgaagaatcca
agagaagctactttaaaagagaaaaccagtaaagaaggaaatcaactcatgatgcgtaaa
gagaatgtacagaatgttgatgaggtgaattctgttttggaaaggattttggggaaataa
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