Novacetimonas hansenii: IFJ82_11940
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Entry
IFJ82_11940 CDS
T06979
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kha
Novacetimonas hansenii
Pathway
kha03420
Nucleotide excision repair
kha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IFJ82_11940
03430 Mismatch repair
IFJ82_11940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kha03400
]
IFJ82_11940
Enzymes [BR:
kha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IFJ82_11940
DNA repair and recombination proteins [BR:
kha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IFJ82_11940
MMR (mismatch excision repair)
Other MMR factors
IFJ82_11940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DUF3553
AAA_22
AAA_16
Tudor_1_RapA
Motif
Other DBs
NCBI-ProteinID:
QOF94596
LinkDB
All DBs
Position
2731262..2733505
Genome browser
AA seq
747 aa
AA seq
DB search
MDSLFPPDHVPPERAPDYLARLNPEQRAAIETTDGPLLVLAGAGTGKTRVLTTRFAHILL
SGRARPNQILAVTFTNKAAREMRERVAGLLGAPVEGLWLGTFHSLCARMLRRHAEYVGLS
GSFTILDTDDQVRLLKQVIEPRHIDTKRWPPQGIMGVIQRWKDRGLTPSRVSKAEDCDFA
DGKCREIYADYQKRLIQLNACDFGDLMLHMTEIMRTHPDVLAQYHRFFRYILVDEYQDTN
TIQYLWLRLLAQRGEGQANICCVGDDDQSIYSWRGAEVENILRFEHDFPGAHVVRLERNY
RSTRQILGAASGLIAHNEERLGKTLHPGREDAEGEKVRVISVWDSDDEARMVGEELERLH
NDGHPLSECAILVRAGFQTRAFEERLITIGLPYRVVGGLRFYERAEIRDALAYMRVLSQP
SDDLAFERIINVPRRGIGNTGVQKLHLHARARDIPLTAAVLEMLATGGIKGRAREHLAAL
MKCFGQCREDLAREGHVVVVERLLEESGYLDMWKADKSPEAPGRLDNLKELVRALADFET
LGGFLEHVALVMETEENAGNERLSIMTLHGAKGLEFDTVFLPGWEEGVFPSQRTMDEGGA
KGLEEERRLAYVGITRARLRAIISHAANRRIYGNWQSAIPSRFVEELPPEHVDTIGDATR
ARHNGAMRSPVFGATPFPVVARRRAVTDATSSGDTPSRKSAFRVGARVFHQKFGYGTIAS
VEGTRLEVAFEKAGTKRVIDTFVEQVS
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggacagtcttttcccccccgaccacgttccccccgaacgtgcgcccgattaccttgcc
cggctcaacccggagcaacgcgccgcgatcgaaacgacggacggcccgctgcttgtcctt
gccggtgcgggcacgggcaagacgcgcgtgctgacgacgcgttttgcccatatcctgctg
tcgggtcgcgcgcgaccgaaccagatccttgccgtgaccttcaccaacaaggccgcacgc
gaaatgcgtgaacgagtcgccggtctgcttggcgcgccggtggaggggctgtggctgggc
acgttccattccctgtgcgcgcgcatgctgcgccgccatgcggaatatgtcggactgtcg
ggcagtttcaccatccttgataccgacgatcaggtccgcctgctcaaacaggtgatcgaa
ccacgccatatcgacaccaaacgctggccgccgcagggaatcatgggcgtcatccagcgg
tggaaggaccgtggcctgaccccatcacgcgtcagcaaggcagaggactgcgactttgcg
gatggtaaatgccgcgagatctatgccgattaccaaaagcgcctgatccagctcaacgcc
tgtgactttggcgacctgatgctgcacatgaccgaaatcatgcgcacccatcccgatgta
ctggcgcagtatcaccggttcttccgctatatcctggttgatgaatatcaagacaccaac
acgatccagtatctgtggctgcgcctgctggcacagcggggggagggacaggccaacatc
tgctgcgtgggggatgatgaccagtcgatctattcctggcgcggggcagaagtggaaaac
atcctgcgcttcgaacatgatttccccggcgcccacgtcgtccgcctggagcgcaactac
cgctccacccggcagatccttggcgcggcgtcgggcctgatcgcccataacgaggaacgg
ttgggcaagacgctgcaccccgggcgcgaggatgcggagggcgagaaggtgcgcgtcatc
tccgtatgggattccgatgacgaggcccgcatggtgggcgaggagctggagcgcctgcac
aatgacgggcatcccctgtcggaatgcgcgattctggtccgtgcggggttccagacccgc
gcgttcgaggaacggctgatcaccatcggcctgccctatcgcgtggttggggggctgcgc
ttttacgaacgtgccgaaatccgcgatgcgctggcctatatgcgtgtgctgtcacagcca
tcggacgaccttgcgtttgaacgcatcatcaacgtcccgcgccggggcatcggcaatacc
ggcgtgcagaaactgcacctgcatgcccgcgcgcgcgacattcccctgaccgccgccgtg
ctggaaatgctggcgacgggcgggatcaagggacgcgcacgcgaacatctggccgccctg
atgaaatgtttcgggcaatgccgcgaggatctggcacgcgaagggcacgtggtcgtggtc
gaacgcctgcttgaggagagcggctatctcgacatgtggaaggcggacaagtcacccgag
gcgccgggacgtctggacaacctcaaggaactggtgcgcgcgctggcggattttgaaacg
ctgggcggattcctcgaacatgtggcgctggtgatggagacggaggaaaacgcaggcaac
gaacggctgagcatcatgaccctgcatggggccaaggggctggagttcgataccgtgttc
ctgccgggatgggaggaaggggtcttcccctcgcaacgcacaatggacgaagggggcgcc
aaggggctggaggaagaacgccgccttgcctatgtcgggatcacgcgcgcacgcctgcgc
gcgatcatcagccatgcggccaaccggcgtatctatggcaactggcagtccgcgattccc
agccgctttgtggaggaacttccccccgaacatgtggacaccatcggggatgcgacccgt
gcccgccataatggcgcgatgcgcagcccggtattcggggccacaccattcccggtcgtg
gcgcgccgccgcgccgtcacagacgcaacgtcgtccggtgatacgccatcgcgcaagtcg
gcctttcgcgttggcgcccgcgttttccatcagaaattcggatacggcaccatcgcgtcc
gtagaaggcacccgtctggaggtcgcgtttgaaaaagcgggcaccaagcgggtgatcgac
acttttgttgagcaggtatcatga
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