Kocuria indica: KocCE7_05030
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Entry
KocCE7_05030 CDS
T05866
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
kii
Kocuria indica
Brite
KEGG Orthology (KO) [BR:
kii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kii03400
]
KocCE7_05030
DNA repair and recombination proteins [BR:
kii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KocCE7_05030
Archaeal homologous recombinant proteins
KocCE7_05030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QBJ22593
UniProt:
A0A4P6RSL7
LinkDB
All DBs
Position
1118349..1121621
Genome browser
AA seq
1090 aa
AA seq
DB search
MEITAFGPFAKRETVDFDVLNEAGVFLLNGETGSGKTSVLDAICFALYGSGPTTAAKGGR
KAQHSDHADPRTGPRVELEFTAGGRRWHVSRTPAWREPSSRAASGWSDRHATVSLREHVA
GQWVDRGYRPDDVGQTIHHVVGLDREQFTQVMMLPQGQFARFLQAGSKEREDLLETLFGT
DVYADIQDELKTRSDRAKSVLYEAEREAERADEVLARLRERVAHTVARLPEDVLSDLPGA
LRTRLDLPSDEGSIGNVAVGTAADANGGETDANSSDQGRASTSAASAASEEGPADGKSGD
ADNEGGPDRWRELVDDCDTLVDTVGRARDGAASSYTGAQQRYAQLETLHSLVRRRGELTR
RRDELAKHAEQSEDAARQLREHEAAQELQAPLVELRDARRRVATLDAAVTDLCATVTGDA
PSARVAQHILGPDASLMDAVDESGQVPAGLRDAVVTAREFARGAVAQEESLTRDEEEAAR
ERKALSALEERATHLTRDLASARDALIRSEESHRELLGEVKDEALVRERARTAREAVAAS
REYARARAEEQERARRYREDETARRAAAQHVEALEAQRYASAAATLATGLEPGDPCPVCG
ATEHPHLAGAGTEDEVTDDALDRARAARDTAQDTVDASHAAWQRAQTGAAEALARGADTD
VDAAVDRCRHADEELARLEQSLTRVRRGEAEIAAARRKVQDLEGEGTRINGDIAGTRARL
EGLLTRCDRVREELALRIRGFDSATEFLERSEHLVRTVSEWESQQRALEAAQHEVRTAQG
AVERALDASPFETESAADEALMDPADAAELSERLTALQEERDSVSAELATQDMQRAEGLS
AEQRAGLSEEALARTAAERDGYEQLRDALNQKLGGLQTLAADAASHAEHMPARHAELERA
RENAQRLGGLADVATANSPENALRMTLTSFVLAAKLEHVAAVASEHLARMSSGRFTLVHT
DRTRGGGKSGLGLEIDDSWTGVRRGTETLSGGESFFTSLALALALADVVRSEAGGQEIDT
LFVDEGFGSLDEQTLEQVLETLDGLRRTGRVIGVVSHVSEMKQRIDTQLVVTKTPGGSHL
SVVAGPWDAA
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggagatcaccgccttcgggccgttcgccaagcgggagacggtggatttcgacgtcctg
aacgaggcaggggtcttcctgctcaacggcgaaaccgggtcgggtaagaccagcgtgttg
gatgccatttgcttcgcgctctacggatccgggcccacgactgccgccaagggcgggcgc
aaggcccagcacagtgatcacgcggatccccgcaccgggccgcgcgtcgagttggagttc
acggcgggtggccggcggtggcacgtgagcaggacgcccgcgtggcgcgaaccgtcctcc
cgggccgcgtccgggtggagcgaccgtcacgccacggtgtcattgcgggaacacgtggcg
gggcaatgggtggaccgcggttaccgcccggacgacgtggggcagaccatccaccacgtc
gtgggcctggaccgtgagcagttcacccaggtgatgatgcttccccagggccagttcgcc
aggttcctgcaagccggttccaaggagcgggaagacctcctggaaacgctattcggcacg
gacgtctacgcggacatccaggatgagctgaaaacgcgctcggatcgagccaagagcgtc
ctgtacgaggcggaacgcgaggcggaacgagcggacgaggtcctcgcccggctcagggaa
cgcgtggcccacacggtcgcccggttaccggaggacgtcttatcggacctccccggggcg
ctccggacccggttggatctcccgtcggacgaggggtcgatcggcaacgtcgccgtgggc
accgcggcggacgccaacggtggagaaaccgacgcgaattcgtctgaccagggccgagcc
tcgaccagtgctgcgtcggccgcttcggaggaggggcccgcggacgggaaatcgggagac
gcagacaacgaagggggcccggatcgatggcgtgagctggtcgacgactgcgacaccctc
gtagacacggtgggccgggcacgggatggcgcggcgtcgtcgtacacaggggcccagcag
cgctacgcacaattggagaccctgcattcgctggtcaggaggcgcggcgaactcacgcgg
cgccgggatgaactcgcgaagcacgcggagcagtcggaggacgcggcccgacaactgcgc
gagcacgaggcggcacaggaattgcaagcgccgctcgtggaactgcgcgacgcccgacgg
cgtgtcgcgacccttgacgccgccgtcaccgacctgtgtgccactgtcacgggggacgcg
ccgtcggcccgcgtggctcagcacattctgggtccggacgcgagcctcatggacgccgtg
gacgagtccgggcaggtgcccgcgggtctgcgcgatgcagtcgtgaccgcgcgcgaattc
gccaggggcgccgtggcccaggaggagtcgctcacgagggacgaggaggaggcggctcgt
gaacgcaaggccctttcggcgctcgaggagcgggcgacgcacctcacccgggacctcgcc
tccgcgcgggacgccttgatccgcagcgaggaatcgcatcgcgaactcctgggggaggtc
aaggacgaggccctcgtgcgcgaacgggcccgcaccgcgcgggaggccgtggccgcgagt
cgggaatacgcacgggcccgggcggaggagcaggaacgggcgcgccggtaccgggaggat
gaaaccgcacggcgggctgccgcccagcacgtggaagcgctcgaagcgcagcgctacgcg
agtgcggccgcgaccctcgccaccgggctggagccgggggatccgtgccccgtgtgcgga
gccacggagcacccgcacctcgccggcgccggaaccgaggacgaggtcaccgatgacgca
ctcgatcgcgcacgcgccgcccgggacaccgcacaggacaccgtggatgcatcccacgca
gcgtggcagcgggcgcagaccggtgcggccgaggcgctcgcgcgcggcgcggacacggac
gtcgacgccgccgtggaccggtgtcgccacgccgatgaggaactggcccgactcgagcag
agcctgacccgggtgcgccggggtgaggccgagatcgcggctgctcggcggaaggtccaa
gatctcgagggggaggggacgcggatcaacggtgacatcgcggggacccgtgcgcgcctc
gagggactcctgacacggtgcgaccgggtgcgtgaggagttggccctgcgcatcaggggt
ttcgattcggccaccgagttcctcgaacggtccgagcacctcgtgcgcacggtgagcgag
tgggaatcgcaacagcgggcgctggaggccgcgcaacacgaggtccgcaccgcgcagggt
gccgtggaacgtgcccttgacgcgtccccgttcgagaccgagagcgccgcggacgaggct
ctcatggacccggcggacgcggccgaactctccgagcggctcaccgccctgcaggaggag
cgggactcagtctcggcggaactcgcgacccaggacatgcaacgcgccgaggggctcagc
gccgagcaacgcgcgggcttgtccgaggaagcactggctcgcaccgccgccgaacgggac
gggtacgaacagttgcgggatgcattgaaccagaagctgggcggactgcagaccctcgcg
gccgacgccgcatcccacgccgagcacatgcccgcccgacacgccgaactcgagcgtgct
cgagagaacgcccagcgcctgggcggactcgcggacgtggccacggcgaactcccccgag
aacgccctgcggatgaccctgacctcgttcgtgctcgccgcgaagctcgagcacgtggcc
gcggtagcgtccgaacacctggcacggatgtcctccggtcgcttcacactggtgcatacg
gatcgcacccgagggggtggcaagtccgggctcggactcgagatcgacgactcgtggacc
ggtgtccgccgcggcacggagacactgtcgggcggggaatccttcttcacctcgctcgcg
ctcgccctggctcttgcggatgtcgtccggtccgaggccgggggacaggagatcgacacg
ctcttcgtggacgagggtttcggctcccttgacgaacaaaccctcgagcaggtcctcgag
accctggacgggttgcgccgcacggggcgggtcatcggtgtggtgtcccacgtgagcgag
atgaaacaacgcatcgacacccagctcgtggtcaccaagacccccggcggctcgcatctg
tcggtcgtcgcggggccgtgggatgccgcgtag
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