Phytobacter ursingii: AB182_17360
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Entry
AB182_17360 CDS
T03950
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
kin
Phytobacter ursingii
Pathway
kin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB182_17360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kin03400
]
AB182_17360
DNA repair and recombination proteins [BR:
kin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB182_17360
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AB182_17360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
AAA_30
UB2H
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKL12966
LinkDB
All DBs
Position
complement(2942282..2944303)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTVANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGHVESTIQR
FTVYPKTHYVTPRERIVQAMEEIKVELVERRKVLLENNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMFRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGEVIDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRKRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAMGETERRREKQQQYNEEHGITPQGLNKKVVDILSLG
ESLAKTKGKGRGKSRTPAQVEAAELALTPKALQQKIHELEGQMMQHAQNLEFEEAAKCRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccattcaaactgaattccgcttttcgaccctctggcgatcagccagaagct
attcgtcgcctggaagaggggctcgaagacggtctggctcatcagactttgctgggcgtg
accggttcagggaaaacgttcaccgtggcgaatgttattgccgatttacagcgcccgacg
atggtgctggcaccgaacaaaacccttgcggcgcagctctatggcgaaatgaaagagttc
tttcccgataacgccgtggaatatttcgtctcctattatgactactatcagccggaagcc
tatgtgccgagttcggacacatttatcgaaaaagacgcctcggtgaacgagcacattgag
cagatgcgtctgtcggctaccaaggcgctgcttgaacgtcgtgatgtgatcgtggtggca
tcggtctccgcaatttacggtctgggcgatccggatctgtatctgaagatgatgttgcac
ctgaccaaaggaatgatcatcgatcagcgctccatactgcgtcgtctggctgagttgcag
tacacccgcaatgaccaggcgtttcagcgcggcacctttcgtgtgcgcggcgaggtgatc
gatatcttcccggcggaatcggacgatattgccctgcgcgttgagctgtttgatgaggaa
gtggagcggctgtcgctgtttgacccgctgaccgggcacgtcgagtccaccatccagcgc
tttaccgtttaccccaaaacccactacgtcaccccacgtgagcgcatcgttcaggcgatg
gaagagatcaaggtcgaactggtcgagcgtcgcaaggtgctgctggagaacaataaactg
ctggaagaacagcggttgacccagcgtacgcagtttgatctggagatgatgaatgagttg
gggtattgctccggtatcgaaaactactcgcgttacctttccgggcgcgggccgggcgag
ccgccgcccacgctatttgattaccttccggcggatggcctgctggtgattgatgaatcc
cacgtcaccattccgcaaattggcggtatgttccgcggcgaccgtgcgcgtaaagagacg
ctggtggagtacggcttccgtctgccgtccgcgctcgataaccgtccactgaaattcgag
gaattcgaggcgctggcaccgcaaaccatttatgtgtcggcgacgccgggcaactatgag
ctggaaaaatctggcggcgaggtcattgaccaggttgtacgtccgaccgggttgctcgat
ccgattatcgaagtgcgaccggtagccacccaggtggacgacctgctctccgaaatccgc
aaacgcgccgccatcaacgagcgtgtgctggtcacgacactgaccaaacgcatggcggaa
gatttgactgaatacctggaagaacacggtgagcgagtgcgttacctgcactccgatatc
gatacggttgaacgtatggagattatccgtgatttacgtcttggcgagttcgatgtgctg
gtgggcatcaacctcctgcgtgaaggtctggatatgccggaagtgtcgttggtggcgatt
ctggatgcggataaagaagggttcctgcgttctgagcgttcgctgattcagaccattggt
cgtgcggcgcgtaacgttaacgggaaggccattctctatggcgacaaaattaccccgtcc
atggcgaaggcgatgggagaaaccgagcgtcgtcgcgagaaacagcagcagtacaacgaa
gaacacggcatcaccccgcagggtttgaacaaaaaagtggtggatattctgagcctcggc
gagagtctggcgaagaccaaaggcaaaggtcgcgggaaatcgcggacgccggctcaggtg
gaagccgccgaactggcgttaaccccaaaagcgctgcagcagaaaattcacgagctggaa
ggacagatgatgcagcatgcgcagaatctcgaattcgaagaggcagcgaaatgccgcgat
cagctgcatcaattgcgggaattgtttattgccgcctcgtaa
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